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January 9, 2025
Journal Article
Title

A data management system for precision medicine

Abstract
Precision, or personalised medicine has advanced requirements for medical data management systems (MedDMSs). MedDMS for precision medicine should be able to process hundreds of parameters from multiple sites, be adaptable while remaining in sync at multiple locations, real-time syncing to analytics and be compliant with international privacy legislation. This paper describes the LogiqSuite software solution, aimed to support a precision medicine solution at the patient care (LogiqCare), research (LogiqScience) and data science (LogiqAnalytics) level. LogiqSuite is certified and compliant with international medical data and privacy legislations. This paper evaluates a MedDMS in five types of use cases for precision medicine, ranging from data collection to algorithm development and from implementation to integration with real-world data. The MedDMS is evaluated in seven precision medicine data science projects in prehospital triage, cardiovascular disease, pulmonology, and oncology. The P4O2 consortium uses the MedDMS as an electronic case report form (eCRF) that allows real-time data management and analytics in long covid and pulmonary diseases. In an acute myeloid leukaemia, study data from different sources were integrated to facilitate easy descriptive analytics for various research questions. In the AIDPATH project, LogiqCare is used to process patient data, while LogiqScience is used for pseudonymous CAR-T cell production for cancer treatment. In both these oncological projects the data in LogiqAnalytics is also used to facilitate machine learning to develop new prediction models for clinical-decision support (CDS). The MedDMS is also evaluated for real-time recording of CDS data from U-Prevent for cardiovascular risk management and from the Stroke Triage App for prehospital triage. The MedDMS is discussed in relation to other solutions for privacy-by-design, integrated data stewardship and real-time data analytics in precision medicine. LogiqSuite is used for multi-centre research study data registrations and monitoring, data analytics in interdisciplinary consortia, design of new machine learning / artificial intelligence (AI) algorithms, development of new or updated prediction models, integration of care with advanced therapy production, and real-world data monitoring in using CDS tools. The integrated MedDMS application supports data management for care and research in precision medicine.
Author(s)
Jacobs, John J.L.
ORTEC (Netherlands)
Beekers, Inés
ORTEC (Netherlands)
Verkouter, Inge
ORTEC (Netherlands)
Richards, Levi B.
ORTEC (Netherlands)
Vegelien, Alexandra
ORTEC (Netherlands)
Bloemsma, Lizan D.
Amsterdam University Medical Centers
Bongaerts, Vera A.M.C.
Leiden University Medical Center
Cloos, Jacqueline
Amsterdam University Medical Centers
Erkens, Frederik  
Fraunhofer-Institut für Produktionstechnologie IPT  
Gradowska, Patrycja
Hort, Simon  orcid-logo
Fraunhofer-Institut für Produktionstechnologie IPT  
Hudecek, Michael
Universitätsklinikum Würzburg
Juan, Manel
Fundació de Recerca Clínic Barcelona-Institut d’Investigacions Biomèdiques August Pi i Sunyer
Maitland-van der Zee, Anke H.
Amsterdam University Medical Centers
Navarro-Velázquez, Sergio
Hospital Clinic of Barcelona
Ngai, Lok Lam
Amsterdam University Medical Centers
Rafiq, Qasim A.
University College London  
Sanges, Carmen
Universitätsklinikum Würzburg
Tettero, Jesse
Amsterdam University Medical Centers
Os, Hendrikus J.A. van
Leiden University Medical Center
Vos, Rimke C.
Leiden University Medical Center
Wit, Yolanda de
Amsterdam University Medical Centers
Dijk, Steven van
ORTEC (Netherlands)
Journal
PLOS Digital Health  
Project(s)
AI powered, Decentralized Production for Advanced Therapies in the Hospital  
Funder
European Commission  
Open Access
File(s)
Download (1.66 MB)
Rights
CC BY 4.0: Creative Commons Attribution
DOI
10.1371/journal.pdig.0000464
10.24406/publica-4192
Additional link
Full text
Language
English
Fraunhofer-Institut für Produktionstechnologie IPT  
Keyword(s)
  • Precision medicine

  • Data management

  • Databases

  • Forecasting

  • Machine learning

  • Ontology

  • Triage

  • Artificial intelligence

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