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  4. KlebPhaCol: a community-driven resource for Klebsiella research identified a novel phage family
 
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2025
Journal Article
Title

KlebPhaCol: a community-driven resource for Klebsiella research identified a novel phage family

Abstract
The growing threat of multidrug-resistant Klebsiella pneumoniae, coupled with its role in gut colonisation, has intensified the search for new treatments, including bacteriophage therapy. Despite increasing documentation of Klebsiella-targeting phages, clinical applications remain limited, with key phage-bacteria interactions still poorly understood. A major obstacle is fragmented access to well-characterised phage-bacteria pairings, restricting the collective advancement of therapeutic and mechanistic insights. To address this gap, we created the Klebsiella Phage Collection (KlebPhaCol), an open resource comprising 52 phages and 74 Klebsiella isolates, characterised at phenotypic and genomic levels. These phages span six families - including a novel family, Felixviridae, associated with the human gut - and target 20 sequence types (including ST258, ST11, and ST14) and 19 capsular-locus types (including KL1 and KL2), across 6 Klebsiella species. Freely accessible at www.klebphacol.org, KlebPhaCol invites the scientific community to both use and contribute to this resource, fostering collaborative research and a deeper understanding of Klebsiella-phage interactions beyond therapeutic use.
Author(s)
Rothschild-Rodriguez, Daniela
University of Southampton
Lambon, Kai S.
University of Southampton
Kushwaha, Simran Krishnakant
University of Southampton
Garushyants, Sofya K.
National Library of Medicine (NLM)
Ertelt, Moritz
Fraunhofer-Institut für Translationale Medizin und Pharmakologie ITMP  
Latka, Agnieszka
Universiteit Gent
Costa, Ana Rita
Department of Bionanoscience, TU Delft
Mantzouratou, Anna
Bournemouth University
King, Claire M.
University of Southampton
Boeckaerts, Dimitri
Universiteit Gent
Sheridan, Elizabeth A.S.
Bournemouth University
Koonin, Eugene V.
National Library of Medicine (NLM)
Merrick, Francesca
University of Southampton
Drobniewski, Francis A.
Bournemouth University
de Angelis, Ilaria
Universiteit Gent
Saeed, Kordo
University Hospital Southampton NHS Foundation Trust
Martin, Macy
University of Southampton
Sutton, J. Mark
UK Health Security Agency
Wand, Matthew E.
UK Health Security Agency
Andrew, Michael
University of Southampton
Hedges, Morgen
University of Southampton
Brouns, Stan J.J.
Department of Bionanoscience, TU Delft
Haas, Pieter Jan A.
University Medical Center Utrecht
Lawson, Sophie T.
UK Health Security Agency
Fordham, Stephen Mark Edward
Bournemouth University
Lee, Yan Jiun
New England Biolabs, Inc.
Wu, Yieri
University of Southampton
Brs, Yves
Universiteit Gent
Braun, Peter
Fraunhofer-Institut für Translationale Medizin und Pharmakologie ITMP  
Weigele, Peter R.
New England Biolabs, Inc.
Nobrega, Franklin L.
University of Southampton
Journal
Nucleic Acids Research  
Open Access
File(s)
Download (2.74 MB)
Rights
CC BY 4.0: Creative Commons Attribution
DOI
10.1093/nar/gkaf1122
10.24406/publica-6869
Additional link
Full text
Language
English
Fraunhofer-Institut für Translationale Medizin und Pharmakologie ITMP  
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