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  4. Mitosis domain generalization in histopathology images - The MIDOG challenge
 
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2023
Journal Article
Title

Mitosis domain generalization in histopathology images - The MIDOG challenge

Abstract
The density of mitotic figures (MF) within tumor tissue is known to be highly correlated with tumor proliferation and thus is an important marker in tumor grading. Recognition of MF by pathologists is subject to a strong inter-rater bias, limiting its prognostic value. State-of-the-art deep learning methods can support experts but have been observed to strongly deteriorate when applied in a different clinical environment. The variability caused by using different whole slide scanners has been identified as one decisive component in the underlying domain shift. The goal of the MICCAI MIDOG 2021 challenge was the creation of scanner-agnostic MF detection algorithms. The challenge used a training set of 200 cases, split across four scanning systems. As test set, an additional 100 cases split across four scanning systems, including two previously unseen scanners, were provided. In this paper, we evaluate and compare the approaches that were submitted to the challenge and identify methodological factors contributing to better performance. The winning algorithm yielded an F1 score of 0.748 (CI95: 0.704-0.781), exceeding the performance of six experts on the same task.
Author(s)
Aubreville, Marc
Stathonikos, Nikolas
Bertram, Christof Albert
Klopfleisch, Robert
ter Hoeve, Natalie D.
Ciompi, Francesco
Wilm, Frauke
Marzahl, Christian
Donovan, Taryn A.
Maier, Andreas K.
Breen, Jack
Ravikumar, Nishant
Chung, Youjin
Park, Jinah
Nateghi, Ramin
Pourakpour, Fattaneh
Fick, Rutger H.J.
Ben Hadj, Saima
Jahanifar, Mostafa
Shephard, Adam J.
Dexl, Jakob
Fraunhofer-Institut für Integrierte Schaltungen IIS  
Wittenberg, Thomas  
Fraunhofer-Institut für Integrierte Schaltungen IIS  
Kondo, Satoshi
Lafarge, Maxime W.
Koelzer, Viktor Hendrik
Liang, Jingtang
Wang, Yubo
Long, Xi
Liu, Jingxin
Razavi, Salar
Khademi, April
Yang, Sen
Wang, Xiyue
Erber, Ramona
Klang , Andrea
Lipnik, Karoline M.
Bolfǎ, Pompei Florin
Dark, Michael J.
Wasinger, Gabriel
Veta, Mitko
Breininger, Katharina
Journal
Medical image analysis : MedIA  
DOI
10.1016/j.media.2022.102699
Additional link
Full text
Language
English
Fraunhofer-Institut für Integrierte Schaltungen IIS  
Keyword(s)
  • Challenge

  • Deep Learning

  • Domain generalization

  • Histopathology

  • Mitosis

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