Fraunhofer-Gesellschaft

Publica

Hier finden Sie wissenschaftliche Publikationen aus den Fraunhofer-Instituten.
2021ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset
Birkenbihl, Colin; Westwood, Sarah; Shi, Liu; Nevado-Holgado, Alejo; Westman, Eric; Lovestone, Simon; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2021Bridging Scales in Alzheimer's Disease: Biological Framework for Brain Simulation With The Virtual Brain
Stefanovski, L.; Meier, J.M.; Pai, R.K.; Triebkorn, P.; Lett, T.; Martin, L.; Bülau, K.; Hofmann-Apitius, M.; Solodkin, A.; McIntosh, A.R.; Ritter, P.
Review
2021Calibration of the Heston stochastic local volatility model: A finite volume scheme
Engelmann, Bernd; Koster, Frank; Oeltz, Daniel
Zeitschriftenaufsatz
2021Caution, "normal" BMI: Health risks associated with potentially masked individual underweight - EPMA Position Paper 2021
Golubnitschaja, Olga; Liskova, A.; Koklesova, L.; Samec, M.; Biringer, K.; Büsselberg, D.; Podbielska, H.; Kunin, A.A.; Evsevyeva, M.E.; Shapira, N.; Paul, F.; Erb, C.; Dietrich, D.E.; Felbel, D.; Karabatsiakis, A.; Bubnov, R.; Polivka, J.; Polivka, J.; Birkenbihl, C.; Fröhlich, Holger; Hofmann-Apitius, M.; Kubatka, P.
Zeitschriftenaufsatz
2021CLEP: A hybrid data- and knowledge-driven framework for generating patient representations
Bharadhwaj, Vinay Srinivas; Ali, Mehdi; Birkenbihl, Colin; Mubeen, Sarah; Lehmann, Jens; Hofmann-Apitius, Martin; Hoyt, Charles Tapley; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2021Converting disease maps into heavyweight ontologies: General methodology and application to Alzheimer's disease
Henry, V.; Moszer, I.; Dameron, O.; Vila Xicota, L.; Dubois, B.; Potier, M.-C.; Hofmann-Apitius, M.; Colliot, O.
Zeitschriftenaufsatz
2021COVID-19 Knowledge Graph: A computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology
Domingo-Fernández, Daniel; Baksi, Shounak; Schultz, Bruce; Gadiya, Yojana; Kark, Reagon; Raschka, Tamara; Ebeling, Christian; Hofmann-Apitius, Martin; Kodamullil, Alpha Tom
Zeitschriftenaufsatz
2021COVID-19 preVIEW: Semantic Search to Explore COVID-19 Research Preprints
Langnickel, L.; Baum, R.; Darms, J.; Madan, S.; Fluck, J.
Konferenzbeitrag
2021Cubature rules for weakly and fully compressible off-lattice Boltzmann methods
Wilde, D.; Krämer, A.; Bedrunka, M.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2021Deletion of Alzheimer's disease-associated CD33 results in an inflammatory human microglia phenotype
Wißfeld, Jannis; Nozaki, Ichiro; Mathews, Mona; Raschka, Tamara; Ebeling, Christian; Hornung, Veit; Brüstle, Oliver; Neumann, Harald
Zeitschriftenaufsatz
2021Efficient method for simulation of long-distance gas transport networks with large amounts of hydrogen injection
Clees, T.; Baldin, A.; Klaassen, B.; Nikitina, L.; Nikitin, I.; Spelten, P.
Zeitschriftenaufsatz
2021Entropy Numbers of Finite Dimensional Mixed-Norm Balls and Function Space Embeddings with Small Mixed Smoothness
Mayer, S.; Ullrich, T.
Zeitschriftenaufsatz
2021An Explainable Multimodal Neural Network Architecture for Predicting Epilepsy Comorbidities Based on Administrative Claims Data
Linden, Thoma; Jong, J. de; Lu, C.; Kiri, V.; Haeffs, K.; Fröhlich, H.
Zeitschriftenaufsatz
2021Fault Detection in Uni-Directional Tape Production Using Image Processing
Devagekar, S.; Delforouzi, A.; Plöger, P.G.
Konferenzbeitrag
2021Identifying multimodal signatures underlying the somatic comorbidity of psychosis: The COMMITMENT roadmap
Schwarz, Emanuel; Alnæs, Dag; Andreassen, Ole A.; Cao, Han; Chen, Junfang; Degenhardt, Franziska; Doncevic, Daria; Dwyer, Dominic; Eils, Roland; Erdmann, Jeanette; Herrmann, Carl; Hofmann-Apitius, Martin; Kaufmann, Tobias; Koutsouleris, Nikolaos; Kodamullil, Alpha Tom; Khuntia, Adyasha; Mucha, Sören; Nöthen, Markus M.; Paul, Riya; Pedersen, Mads L.; Quintero, Andres; Schunkert, Heribert; Sharma, Ashwini; Tost, Heike; Westlye, Lars T.; Zhang, Youcheng; Meyer-Lindenberg, Andreas
Editorial
2021Inlinetauglichkeit von zerstörungsfreien Prüfmethoden für den digitalen Zwilling von thermoplastischen Carbonfaser-Tapes
Koster, Dirk; Summa, Jannik; Jungmann, Christian; Rabe, Ute; Herrmann, Hans-Georg; Link, Tobias; John, Marianne; Nagel, Frank; Schlimper, Ralf; Delforouzi, Ahmad; Roggenbuck, Josef; Wolf, Klaus
Konferenzbeitrag
2021Linking COVID-19 and Heme-Driven Pathophysiologies: A Combined Computational-Experimental Approach
Hopp, Marie-Thérèse; Domingo-Fernández, Daniel; Gadiya, Yojana; Detzel, Milena; Graf, Regina; Schmalohr Benjamin; Kodamullil, Alpha Tom; Imhof, Diana; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2021Mathematical modeling and visualization of topologically non-trivial solutions in general relativity
Nikitin, I.
Konferenzbeitrag
2021A method for the rational selection of drug repurposing candidates from multimodal knowledge harmonization
Schultz, B.; Zaliani, A.; Ebeling, C.; Reinshagen, J.; Bojkova, D.; Lage-Rupprecht, V.; Karki, R.; Lukassen, S.; Gadiya, Y.; Ravindra, N.G.; Das, S.; Baksi, S.; Domingo-Fernandez, D.; Lentzen, M.; Strivens, M.; Raschka, T.; Cinatl, J.; DeLong, L.N.; Gribbon, P.; Geisslinger, G.; Ciesek, S.; Dijk, D. van; Gardner, S.; Kodamullil, A.T.; Fröhlich, H.; Peitsch, M.; Jacobs, M.; Hoeng, J.; Eils, R.; Claussen, C.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2021MultiPaths. A python framework for analyzing multi-layer biological networks using diffusion algorithms
Marín-Llaó, Josep; Mubeen, Sarah; Perera-Lluna, Alexandre; Hofmann-Apitius, Martin; Picart-Armada, Sergio; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2021NFDI4Health - Nationale Forschungsdateninfrastruktur für personenbezogene Gesundheitsdaten
Fluck, J.; Lindstädt, B.; Ahrens, W.; Beyan, O.; Buchner, B.; Darms, J.; Depping, R.; Dierkes, J.; Neuhausen, H.; Müller, W.; Zeeb, H.; Golebiewski, M.; Löffler, M.; Löbe, M.; Meineke, F.; Klammt, S.; Fröhlich, Holger; Hahn, H.; Schulze, M.; Pischon, T.; Nöthlings, U.; Sax, U.; Kusch, H.; Grabenhenrich, L.; Schmidt, C.O.; Waltemath, D.; Semler, S.; Gehrke, J.; Kirsten, T.; Praßer, F.; Thun, S.; Wieler, L.; Pigeot, I.
Zeitschriftenaufsatz
2021On dark stars, galactic rotation curves and fast radio bursts
Nikitin, I.
Konferenzbeitrag
2021Pure Functions in C: A Small Keyword for Automatic Parallelization
Süß, T.; Nagel, L.; Vef, M.-A.; Brinkmann, A.; Feld, D.; Soddemann, T.
Zeitschriftenaufsatz
2021Remote monitoring technologies in Alzheimer's disease: Design of the RADAR-AD study
Muurling, M.; Boer, C. de; Kozak, R.; Religa, D.; Koychev, I.; Verheij, H.; Nies, V.J.M.; Duyndam, A.; Sood, M.; Fröhlich, H.; Hannesdottir, K.; Erdemli, G.; Lucivero, F.; Lancaster, C.; Hinds, C.; Stravopoulos, T.G.; Nikolopoulos, S.; Kompatsiaris, I.; Manyakov, N.V.; Owens, A.P.; Narayan, V.A.; Aarsland, D.; Visser, P.J.
Zeitschriftenaufsatz
2021SEEDS: Data driven inference of structural model errors and unknown inputs for dynamic systems biology
Newmiwaka, Tobias; Engelhardt, Benjamin; Wendland, Philipp; Kahl, Dominik; Fröhlich, Holger; Kschischo, Maik
Zeitschriftenaufsatz
2021A Systems Biology Approach for Hypothesizing the Effect of Genetic Variants on Neuroimaging Features in Alzheimer’s Disease
Golriz Khatami, Sepehr; Domingo-Fernandez, D.; Mubeen, S.; Hoyt, C.T.; Robinson, C.; Karki, R.; Iyappan, A.; Kodamullil, A.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2021Towards a global investigation of transcriptomic signatures through co-expression networks and pathway knowledge for the identification of disease mechanisms
Figueiredo, Rebeca Quiroz; Raschka, Tamara; Kodamullil, Alpha Tom; Hofmann-Apitius, Martin; Mubeen, Sarah; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2021Towards realizing the vision of precision medicine: AI based prediction of clinical drug response
Jong, Johann de; Cutcutache, Ioana; Page, Matthew; Elmoufti, Sami; Dilley, Cynthia; Fröhlich, Holger; Armstrong, Martin
Zeitschriftenaufsatz
2021Unraveling the heterogeneity in Alzheimer's disease progression across multiple cohorts and the implications for data-driven disease modeling
Birkenbihl, Colin; Salimi, Yasamin; Fröhlich, Holger
Zeitschriftenaufsatz
2021Utilizing Minimum Set-Cover Structures with Several Constraints for Knowledge Discovery on Large Literature Databases
Dörpinghaus, J.; Düing, C.; Weil, V.
Konferenzbeitrag
2021Zerstörungsfreie Prüfmethoden zur Merkmalsextraktion für den digitalen Zwilling der Thermoplast-Composite Wertschöpfungskette
Summa, Jannik; Rabe, Ute; Pudovikov, Sergey; Jungmann, Christian; Koster, Dirk; Herrmann, Hans-Georg; Link, Tobias; John, Marianne; Nagel, Frank; Schlimper, Ralf; Delforouzi, Ahmad; Roggenbuck, Josef; Wolf, Klaus
Konferenzbeitrag
2020Algebraic multigrid for the finite pointset method
Metsch, B.; Nick, F.; Kuhnert, J.
Zeitschriftenaufsatz
2020Algebraic Wavefront Parallelization for ILU(0) Smoothing in Reservoir Simulation
Gries, Sebastian
Konferenzbeitrag
2020Analysis and Prediction of Deforming 3D Shapes using Oriented Bounding Boxes and LSTM Autoencoders
Hahner, Sara; Iza-Teran, Rodrigo; Garcke, Jochen
Konferenzbeitrag
2020Application cases of biological transformation in manufacturing technology
Bergs, T.; Schwaneberg, U.; Barth, S.; Hermann, L.; Grunwald, T.; Mayer, S.; Biermann, F.; Sözer, N.
Zeitschriftenaufsatz
2020Automatic analysis of crash simulations with dimensionality reduction algorithms such as PCA and t-SNE
Kracker, David; Garcke, Jochen; Schumacher, Axel; Schwanitz, P.
Konferenzbeitrag
2020Challenges of Integrative Disease Modeling in Alzheimer's Disease
Golriz Khatami, Sepehr; Robinson, C.; Birkenbihl, C.; Domingo-Fernandez, D.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2020Clustering of Alzheimer's and Parkinson's disease based on genetic burden of shared molecular mechanisms
Emon, Mohammad Asif; Heinson, Ashley; Wu, Ping; Domingo-Fernández, Daniel; Sood, Meemansa; Vrooman, Henri; Corvol, Christophe; Scordis, Phil; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Combining Machine Learning and Simulation to a Hybrid Modelling Approach: Current and Future Directions
Rüden, Laura von; Mayer, Sebastian; Sifa, Rafet; Bauckhage, Christian; Garcke, Jochen
Konferenzbeitrag
2020A Compact Spectral Descriptor for Shape Deformations
Sible, Skylar; Iza-Teran, Rodrigo; Garcke, Jochen; Aulig, Nikola; Wollstadt, Patricia
Konferenzbeitrag
2020Comprehensive analysis of tumor necrosis factor receptor TNFRSF9 (4-1BB) DNA methylation with regard to molecular and clinicopathological features, immune infiltrates, and response prediction to immunotherapy in melanoma
Fröhlich, A.; Loick, S.; Bawden, E.G.; Fietz, S.; Dietrich, J.; Diekmann, E.; Saavedra, G.; Fröhlich, H.; Niebel, D.; Sirokay, J.; Zarbl, R.; Gielen, G.H.; Kristiansen, G.; Bootz, F.; Landsberg, J.; Dietrich, D.
Zeitschriftenaufsatz
2020A Computational Approach for Mapping Heme Biology in the Context of Hemolytic Disorders
Humayun, Farah; Domingo-Fernández, Daniel; Abisheck Paul George, Ajay; Hopp, Marie-Thérèse; Syllwasschy, Benjamin; Detzel, Milena; Tapley Hoyt, Charles; Hofmann-Apitius, Martin; Imhof, Diana
Zeitschriftenaufsatz
2020Corrigendum: The Impact of Pathway Database Choice on Statistical Enrichment Analysis and Predictive Modeling
Mubeen, S.; Tapley Hoyt, C.; Gemünd, A.; Hofmann-Apitius, M.; Fröhlich, H.; Domingo-Fernandez, D.
Zeitschriftenaufsatz
2020The COVID-19 Ontology
Sargsyan, Astghik; Kodamullil, Alpha Tom; Baksi, Shounak; Darms, Johannes; Madan, Sumit; Gebel, Stephan; Keminer, Oliver; Jose, Geena Mariya; Balabin, Helena; DeLong, Lauren Nicole; Kohler, Manfred; Jacobs, Marc; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020CTO: A community-based clinical trial ontology and its applications in PubChemRDF and SCAIView
Lin, A.Y.; Gebel, S.; Li, Q.L.; Madan, S.; Darms, J.; Bolton, E.; Smith, B.; Hofmann-Apitius, M.; He, Y.O.; Kodamullil, A.T.
Konferenzbeitrag
2020Data science in neurodegenerative disease
Golriz Khatami, Sepehr; Mubeen, S.; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Data-Driven Modeling of Knowledge Assemblies in Understanding Comorbidity Between Type 2 Diabetes Mellitus and Alzheimer’s Disease
Karki, Reagon; Madan, Sumit; Gadiya, Yojana; Domingo-Fernandez, Daniel; Kodamullil, Alpha Tom; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Determination of relevant mechanical properties for the production process of polyethylene by using mesoscale molecular simulation techniques
Grommes, D.; Reith, D.
Zeitschriftenaufsatz
2020Differences in cohort study data affect external validation of artificial intelligence models for predictive diagnostics of dementia - lessons for translation into clinical practice
Birkenbihl, Colin; Emon, Mohammad Asif; Vrooman, Henri; Westwood, Sarah; Lovestone, Simon; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Drug repositioning of antiretroviral ritonavir for combinatorial therapy in glioblastoma
Rauschenbach, Laurèl; Wieland, Anja; Reinartz, Roman; Kebir, Sied; Till, Andreas; Darkwah Oppong, Marvin; Dobersalske, Celia; Ullrich, Vivien; Ahmad, Ashar; Jabbarli, Ramazan; Pierscianek, Daniela; Fröhlich, Holger; Simon, Matthias; Brüstle, Oliver; Sure, Ulrich; Glas, Martin; Scheffler, Björn
Zeitschriftenaufsatz
2020Drug2ways: Reasoning over causal paths in biological networks for drug discovery
Rivas-Barragan, Daniel; Mubeen, Sarah; Guim Bernat, Francesc; Hofmann-Apitius, Martin; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2020Evaluating the Alzheimer's disease data landscape
Birkenbihl, Colin; Salimi, Yasamin; Domingo-Fernandez, Daniel; Lovestone, Simon; Fröhlich, Holger; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Explain it to me - facing remote sensing challenges in the bio- and geosciences with explainable machine learning
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J.
Konferenzbeitrag
2020Explainable Machine Learning for Scientific Insights and Discoveries
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J.
Zeitschriftenaufsatz
2020The future of German MeSH: a new semi-automatic translation process and new services for search and annotation
Langnickel, Lisa; Baum, Roman; Wollnik-Korn, Gabriele; Fischer-Wagener, Brigitte; Madan, Sumit; Fluck, Juliane
Zeitschriftenaufsatz
2020Generalization of algebraic multiscale to algebraic multigrid
Ehrmann, Silvia; Gries, Sebastian; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2020GuiltyTargets: Prioritization of Novel Therapeutic Targets with Deep Network Representation Learning
Muslu, Özlem; Hoyt, Charles Tapley; Lacerda, Mauricio Pio de; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Informed Machine Learning - A Taxonomy and Survey of Integrating Knowledge into Learning Systems
Rüden, Laura von; Mayer, Sebastian; Beckh, Katharina; Georgiev, Bogdan; Giesselbach, Sven; Heese, Raoul; Kirsch, Birgit; Pfrommer, Julius; Pick, Annika; Ramamurthy, Rajkumar; Walczak, Michal; Garcke, Jochen; Bauckhage, Christian; Schuecker, Jannis
Preprint
2020A Landscape Analysis of Standardisation in the Field of Artificial Intelligence
Ziegler, Wolfgang
Zeitschriftenaufsatz
2020Lattice Boltzmann simulations on irregular grids
Krämer, Andreas; Wilde, Dominik; Küllmer, Knut; Reith, Dirk; Foysi, Holger; Joppich, Wolfgang
Zeitschriftenaufsatz
2020Mathematical Modeling of Alkaline Methanol Oxidation for Design of Efficient Fuel Cells
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa
Konferenzbeitrag
2020Multicenter Alzheimer's and Parkinson's disease immune biomarker verification study
Brosseron, Frederic; Kolbe, Carl-Christian; Santarelli, Francesco; Carvalho, Stephanie; Antonell, Anna; Castro-Gomez, Sergio; Tacik, Pawel; Namasivayam, Aishwarya Alex; Mangone, Graziella; Schneider, Reinhard; Latz, Eicke; Wüllner, Ullrich; Svenningsson, Per; Sánchez-Valle, Raquel; Molinuevo, José Luis; Corvol, Jean-Christophe; Heneka, Michael T.; Hofmann-Apitius, Martin; Springstubbe, Stephan; Fröhlich, Holger et al.
Zeitschriftenaufsatz
2020Neural Network Compression via Learnable Wavelet Transforms
Wolter, Moritz; Lin, Shaohui; Yao, Angela
Konferenzbeitrag
2020A note on £2p-completeness of a robust binary linear program with binary uncertainty set
Claus, M.; Simmoteit, M.
Zeitschriftenaufsatz
2020Optimal multiparametric set-up modelled for best survival outcomes in palliative treatment of liver malignancies
Goldstein, Elisha; Yeghiazaryan, Kristina; Ahmad, Ashar; Giordano, Frank A.; Fröhlich, Holger; Golubnitschaja, Olga
Zeitschriftenaufsatz
2020The origin of the hysteresis in cyclic voltammetric response of alkaline methanol electrooxidation
Haisch, Theresa; Kubannek, Fabian; Nikitina, Lialia; Nikitin, Igor; Pott, Sabine; Clees, Tanja; Krewer, Ulrike
Zeitschriftenaufsatz
2020Parameter Identification and Model Reduction in the Design of Alkaline Methanol Fuel Cells
Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa; Kubannek, Fabian
Zeitschriftenaufsatz
2020PathME: Pathway based multi-modal sparse autoencoders for clustering of patient-level multi-omics data
Lemsara, Amina; Ouadfel, Salima; Fröhlich, Holger
Zeitschriftenaufsatz
2020Proposal of an Architecture for Terminology Management in a Research Project
Mora, Sara; Madan, Sumit; Gebel, Stephan; Giacomini, Mauro
Konferenzbeitrag
2020PS4DR: A multimodal workflow for identification and prioritization of drugs based on pathway signatures
Emon, Mohammad Asif; Domingo-Fernandez, Daniel; Tapley Hoyt, Charles; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Quantum Machine Learning. Eine Analyse zu Kompetenz, Forschung und Anwendung
Bauckhage, Christian; Brito, Eduardo; Daase, Inga; Franken, Lukas; Georgiev, Bogdan; Hecker, Dirk; Paschke, Adrian; Piatkowski, Nico; Soddemann, Thomas; Trabold, Daniel
Studie
2020Realistic simulation of virtual multi-scale, multi-modal patient trajectories using Bayesian networks and sparse auto-encoders
Sood, M.; Sahay, A.; Karki, R.; Emon, M.A.; Vrooman, H.; Hofmann-Apitius, M.; Fröhlich, H.
Zeitschriftenaufsatz
2020The recovery of ridge functions on the hypercube suffers from the curse of dimensionality
Doerr, B.; Mayer, S.
Zeitschriftenaufsatz
2020SEAweb: The small RNA Expression Atlas web application
Rahman, Raza-Ur; Liebhoff, Anna-Maria; Bansal, Vikas; Fiosins, Maksims; Rajput, Ashish; Sattar, Abdul; Magruder, Daniel S.; Madan, Sumit; Sun, Ting; Gautam, Abhivyakti; Heins, Sven; Liwinski, Timur; Bethune, Jörn; Trenkwalder, Claudia; Fluck, Juliane; Mollenhauer, Brit; Bonn, Stefan
Zeitschriftenaufsatz
2020Semi-Lagrangian lattice Boltzmann method for compressible flows
Wilde, D.; Krämer, A.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2020Sequence Prediction Using Spectral RNNs
Wolter, Moritz; Gall, Jürgen; Yao, Angela
Konferenzbeitrag
2020Simplex stochastic collocation for piecewise smooth functions with kinks
Fuchs, Barbara; Garcke, Jochen
Zeitschriftenaufsatz
2020Solving sorting of rolling stock problems utilizing pseudochain structures in graphs
Dörpinghaus, J.; Schrader, R.
Konferenzbeitrag
2020Stochastic subspace correction methods and fault tolerance
Griebel, M.; Oswald, P.
Zeitschriftenaufsatz
2020Systems Toxicology Approach for Testing Chemical Cardiotoxicity in Larval Zebrafish
Li, Roman; Zupanic, Anze; Talikka, Marja; Belcastro, Vincenzo; Madan, Sumit; Dörpinghaus, Jens; Berg, Colette vom; Szostak, Justyna; Martin, Florian; Peitsch, Manuel C.; Hoeng, Julia
Zeitschriftenaufsatz
2020Topological Reduction of Stationary Network Problems: Example of Gas Transport
Baldin, Anton; Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia
Zeitschriftenaufsatz
2020Variational Autoencoder Modular Bayesian Networks for Simulation of Heterogeneous Clinical Study Data
Gootjes-Dreesbach, Luise; Sood, Meemansa; Sahay, Akrishta; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Voice perturbations under the stress overload in young individuals: Phenotyping and suboptimal health as predictors for cascading pathologies
Kunin, Anatolij; Sargheini, Nafiseh; Birkenbihl, Colin; Moiseeva, Natalia; Fröhlich, Holger; Golubnitschaja, Olga
Zeitschriftenaufsatz
2020What identifies a whale by its fluke? On the benefit of interpretable machine learning for whale identification
Kierdorf, J.; Garcke, J.; Behley, J.; Cheeseman, T.; Roscher, R.
Konferenzbeitrag
2019Abstract Decision Engine for Task Scheduling in Linux Based Operating Systems
Sadasivam, S.; Ewering, M.; Schwichtenberg, H.
Konferenzbeitrag
2019Analysis of Turbulent Flow Data Based on a Spectral Basis Representation
Garcke, J.; Iza Teran, R.; Gscheidle, C.; Berger, L.
Konferenzbeitrag
2019Association of single and multiple aneurysms with tobacco abuse: An @neurIST risk analysis
Schatlo, B.; Gautschi, O.P.; Friedrich, C.M.; Ebeling, C.; Jägersberg, M.; Kulscar, Z.; Pereira, V.M.; Schaller, K.; Bijlenga, P.
Zeitschriftenaufsatz
2019BioKEEN: a library for learning and evaluating biological knowledge graph embeddings
Ali, M.; Hoyt, C.T.; Domingo-Fernandez, D.; Lehmann, J.; Jabeen, H.
Zeitschriftenaufsatz
2019Cognitive Systems and Robotics
Bauckhage, Christian; Bauernhansl, Thomas; Beyerer, Jürgen; Garcke, Jochen
Aufsatz in Buch
2019Contribution of syndecans to cellular internalization and fibrillation of amyloid-β(1–42)
Letoha, T.; Hudák, A.; Kusz, E.; Pettkó-Szandtner, A.; Domonkos, I.; Jósvay, K.; Hofmann-Apitius, M.; Szilák, L.
Zeitschriftenaufsatz
2019Contribution of syndecans to cellular uptake and fibrillation of α-synuclein and tau
Hudák, A.; Kusz, E.; Domonkos, I.; Jósvay, K.; Kodamullil, A.T.; Szilák, L.; Hofmann-Apitius, M.; Letoha, T.
Zeitschriftenaufsatz
2019Converting alzheimer’s disease map into a heavyweight ontology: A formal network to integrate data
Henry, V.; Moszer, I.; Dameron, O.; Potier, M.-C.; Hofmann-Apitius, M.; Colliot, O.
Konferenzbeitrag
2019DARE: A reflective platform designed to enable agile data-driven research on the cloud
Klampanos, I.; Davvetas, A.; Gemünd, A.; Atkinson, M.; Koukourikos, A.; Filgueira, R.; Krause, A.; Spinuso, A.; Charalambidis, A.; Magnoni, F.; Casarotti, E.; Page, C.; Lindner, M.; Ikonomopoulos, A.; Karkaletsis, V.
Konferenzbeitrag
2019Deep learning for clustering of multivariate clinical patient trajectories with missing values
Jong, Johann de; Emon, Mohammad Asif; Wu, Ping; Karki, Reagon; Sood, Meemansa; Godard, Patrice; Ahmad, Ashar; Vrooman, Henri; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2019Efficient modeling of internal cracks for Laplace problem by XFEM using Joukowski mapping
Nakasumi, Shogo; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2019Experimentelle Validierung einer Simulation mit Fluid-Struktur-Interaktion
Brief, Victoria
: Kleinert, Jan
Master Thesis
2019The extraction of complex relationships and their conversion to biological expression language (BEL) overview of the BioCreative VI (2017) BEL track
Madan, S.; Szostak, J.; Elayavilli, R.K.; Tsai, R.T.H.; Ali, M.; Qian, L.H.; Rastegar-Mojarad, M.; Hoeng, J.; Fluck, J.
Zeitschriftenaufsatz
2019A fast prediction method for rotor buzz-saw noise based on an analytical approach
Moreau, Antoine; Staggat, Martin; Gscheidle, Christian
Konferenzbeitrag
2019A framework for managing quality of service in cloud computing through service level agreements
Ziegler, Wolfgang
: Yahyapour, Ramin; Grabowski, Jens; Kranzlmüller, Dieter
Dissertation
2019Fraunhofer Institute for Algorithms and Scientific Computing. Annual Report 2018/2019
 
Jahresbericht
2019A geometrical method for low-dimensional representations of simulations
Iza-Teran, R.; Garcke, J.
Zeitschriftenaufsatz
2019Global-local enrichments in PUMA
Birner, M.; Schweitzer, M.A.
Konferenzbeitrag
2019The Impact of Pathway Database Choice on Statistical Enrichment Analysis and Predictive Modeling
Mubeen, Sarah; Hoyt, Charles Tapley; Gemünd, André; Hofmann-Apitius, Martin; Fröhlich, Holger; Domingo-Fernandez, Daniel
Zeitschriftenaufsatz
2019An integrative simulation concept for extrusion blow molded plastic bottles
Michels, Patrick; Grommes, Dirk; Oeckerath, Andre; Reith, Dirk; Bruch, Olaf
Zeitschriftenaufsatz
2019The KEEN Universe. An Ecosystem for Knowledge Graph Embeddings with a Focus on Reproducibility and Transferability
Ali, M.; Jabeen, H.; Hoyt, C.T.; Lehmann, J.
Konferenzbeitrag
2019Kernel-based stochastic collocation for the random two-phase navier-stokes equations
Griebel, Michael; Rieger, Christian; Zaspel, Peter
Zeitschriftenaufsatz
2019Knowledge Extraction and Applications utilizing Context Data in Knowledge Graphs
Dörpinghaus, Jens; Stefan, Andreas
Konferenzbeitrag
2019MCMC Techniques for Parameter Estimation of ODE Based Models in Systems Biology
Valderrama-Bahamóndez, Gloria I.; Fröhlich, Holger
Zeitschriftenaufsatz
2019Meshfree methods for partial differential equations IX
: Griebel, Michael; Schweitzer, Marc Alexander
Tagungsband
2019A Minimum Set-Cover Problem with several constraints
Dörpinghaus, Jens; Düing, Carsten; Weil, Vera
Konferenzbeitrag
2019Model Reduction in the Design of Alkaline Methanol Fuel Cells
Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa
Konferenzbeitrag
2019Optimally rotated coordinate systems for adaptive least-squares regression on sparse grids
Bohn, Bastian; Griebel, Michael; Oettershagen, Jens
Konferenzbeitrag
2019Parallel detection of subsystems in linear systems arising in the MESHFREE finite pointset method
Nick, F.; Plum, H.-J.; Kuhnert, J.
Konferenzbeitrag
2019PathMe: Merging and exploring mechanistic pathway knowledge
Domingo-Fernandez, D.; Mubeen, S.; Marín-Llaó, J.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019Predicting Missing Links Using PyKEEN
Ali, Mehdi; Hoyt, Charles Tapley; Domingo-Fernandez, Daniel; Lehmann, Jens
Konferenzbeitrag
2019PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine
Gonzalez-Hernandez, G.; Lu, Z.Y.; Leaman, R.; Weissenbacher, D.; Boland, M.R.; Chen, Y.; Du, J.C.; Fluck, J.; Greene, C.S.; Holmes, J.; Kashyap, A.; Nielsen, R.L.; Ouyang, Z.Q.; Schaaf, S.; Taroni, J.N.; Tao, C.; Zhang, Y.P.; Liu, H.F.
Konferenzbeitrag
2019Pseudoentropic derivation of the regularized lattice Boltzmann method
Krämer, A.; Wilde, D.; Küllmer, K.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2019PTSD Biomarker Database: Deep Dive Metadatabase for PTSD Biomarkers, Visualizations and Analysis Tools
Domingo-Fernandez, Daniel; Provost, Allison; Kodamullil, Alpha Tom; Marín-Llaó, Josep; Lasseter, Heather; Diaz, Kristophe; Daskalakis, Nikolaos P.; Lancashire, Lee; Hofmann-Apitius, Martin; Haas, Magali
Zeitschriftenaufsatz
2019Publisher Correction: ComPath: An ecosystem for exploring, analyzing, and curating mappings across pathway databases (vol 4, 43, 2018)
Domingo-Fernandez, D.; Hoyt, C.T.; Bobis-Alvarez, C.; Marin-Llao, J.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019Quantifying mechanisms in neurodegenerative diseases (NDDs) using candidate mechanism perturbation amplitude (CMPA) algorithm
Karki, R.; Kodamullil, A.T.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019RatVec: A General Approach for Low-dimensional Distributed Vector Representations via Rational Kernels
Brito, Eduardo; Georgiev, Bogdan; Domingo-Fernández, Daniel; Hoyt, Charles Tapley; Bauckhage, Christian
Konferenzbeitrag
2019Re-curation and rational enrichment of knowledge graphs in Biological Expression Language
Hoyt, C.T.; Domingo-Fernández, D.; Aldisi, R.; Xu, L.; Kolpeja, K.; Spalek, S.; Wollert, E.; Bachman, J.; Gyori, B.M.; Greene, P.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019A Representer Theorem for Deep Kernel Learning
Bohn, Bastian; Rieger, Christian; Griebel, Michael
Zeitschriftenaufsatz
2019Scalable Linear Solvers for Computational Material Design of Filled Rubbers
Hülsmann, Gösta; Kechel, Arnold; Plum, Hans-Joachim; Schweitzer, Marc Alexander; Hu, Wei; Wu, C.T.; Koishi, Masataka
Konferenzbeitrag
2019Semantic knowledge graph embeddings for biomedical research: data integration using linked open data
Dörpinghaus, J.; Jacobs, M.
Konferenzbeitrag
2019Simulation of micron-scale drop impact
Griebel, Michael; Klitz, Margrit
Zeitschriftenaufsatz
2019Singular value decomposition versus sparse grids: Refined complexity estimates
Griebel, Michael; Harbrecht, Helmut
Zeitschriftenaufsatz
2019Stable and efficient quantum mechanical calculations with PUMA on triclinic lattices
Albrecht, C.; Klaar, C.; Schweitzer, M.A.
Konferenzbeitrag
2019System-AMG for Fully Coupled Reservoir Simulation with Geomechanics
Gries, Sebastian; Metsch, Bram; Tomin, Pavel; Terekhov, Kirill M.
Konferenzbeitrag
2019Topological Reduction of Gas Transport Networks
Baldin, Anton; Clees, Tanja; Fuchs, Barbara; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Torgovitskaia, Inna
Konferenzbeitrag