Gündel, MichaelaMichaelaGündelHoyt, Charles TapleyCharles TapleyHoytHofmann-Apitius, MartinMartinHofmann-Apitius2022-03-052022-03-052018https://publica.fraunhofer.de/handle/publica/25539910.1093/bioinformatics/bty1072-s2.0-85050811351While cause-and-effect knowledge assembly models encoded in Biological Expression Language are able to support generation of mechanistic hypotheses, they are static and limited in their ability to encode temporality. Here, we present BEL2ABM, a software for producing continuous, dynamic, executable agent-based models from BEL templates.en003570005006518journal article