Fraunhofer-Gesellschaft

Publica

Hier finden Sie wissenschaftliche Publikationen aus den Fraunhofer-Instituten.
2020Algebraic multigrid for the finite pointset method
Metsch, B.; Nick, F.; Kuhnert, J.
Zeitschriftenaufsatz
2020Challenges of Integrative Disease Modeling in Alzheimer's Disease
Golriz Khatami, Sepehr; Robinson, C.; Birkenbihl, C.; Domingo-Fernandez, D.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2020Combining Machine Learning and Simulation to a Hybrid Modelling Approach: Current and Future Directions
Rüden, Laura von; Mayer, Sebastian; Sifa, Rafet; Bauckhage, Christian; Garcke, Jochen
Konferenzbeitrag
2020Comprehensive analysis of tumor necrosis factor receptor TNFRSF9 (4-1BB) DNA methylation with regard to molecular and clinicopathological features, immune infiltrates, and response prediction to immunotherapy in melanoma
Fröhlich, A.; Loick, S.; Bawden, E.G.; Fietz, S.; Dietrich, J.; Diekmann, E.; Saavedra, G.; Fröhlich, H.; Niebel, D.; Sirokay, J.; Zarbl, R.; Gielen, G.H.; Kristiansen, G.; Bootz, F.; Landsberg, J.; Dietrich, D.
Zeitschriftenaufsatz
2020A Computational Approach for Mapping Heme Biology in the Context of Hemolytic Disorders
Humayun, Farah; Domingo-Fernández, Daniel; Abisheck Paul George, Ajay; Hopp, Marie-Thérèse; Syllwasschy, Benjamin; Detzel, Milena; Tapley Hoyt, Charles; Hofmann-Apitius, Martin; Imhof, Diana
Zeitschriftenaufsatz
2020Corrigendum: The Impact of Pathway Database Choice on Statistical Enrichment Analysis and Predictive Modeling
Mubeen, S.; Tapley Hoyt, C.; Gemünd, A.; Hofmann-Apitius, M.; Fröhlich, H.; Domingo-Fernandez, D.
Zeitschriftenaufsatz
2020COVID-19 Knowledge Graph: A computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology
Domingo-Fernández, Daniel; Baksi, Shounak; Schultz, Bruce; Gadiya, Yojana; Kark, Reagon; Raschka, Tamara; Ebeling, Christian; Hofmann-Apitius, Martin; Kodamullil, Alpha Tom
Zeitschriftenaufsatz
2020Data science in neurodegenerative disease
Golriz Khatami, Sepehr; Mubeen, S.; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Determination of relevant mechanical properties for the production process of polyethylene by using mesoscale molecular simulation techniques
Grommes, D.; Reith, D.
Zeitschriftenaufsatz
2020Differences in cohort study data affect external validation of artificial intelligence models for predictive diagnostics of dementia - lessons for translation into clinical practice
Birkenbihl, Colin; Emon, Mohammad Asif; Vrooman, Henri; Westwood, Sarah; Lovestone, Simon; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Entropy Numbers of Finite Dimensional Mixed-Norm Balls and Function Space Embeddings with Small Mixed Smoothness
Mayer, S.; Ullrich, T.
Zeitschriftenaufsatz
2020Explain it to me - facing remote sensing challenges in the bio- and geosciences with explainable machine learning
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J.
Konferenzbeitrag
2020Explainable Machine Learning for Scientific Insights and Discoveries
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J.
Zeitschriftenaufsatz
2020Generalization of algebraic multiscale to algebraic multigrid
Ehrmann, Silvia; Gries, Sebastian; Schweitzer, Marc Alexander
Zeitschriftenaufsatz, Konferenzbeitrag
2020GuiltyTargets: Prioritization of Novel Therapeutic Targets with Deep Network Representation Learning
Muslu, Özlem; Hoyt, Charles Tapley; Lacerda, Mauricio Pio de; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Informed Machine Learning - A Taxonomy and Survey of Integrating Knowledge into Learning Systems
Rüden, Laura von; Mayer, Sebastian; Beckh, Katharina; Georgiev, Bogdan; Giesselbach, Sven; Heese, Raoul; Kirsch, Birgit; Pfrommer, Julius; Pick, Annika; Ramamurthy, Rajkumar; Walczak, Michal; Garcke, Jochen; Bauckhage, Christian; Schuecker, Jannis
Bericht
2020A Landscape Analysis of Standardisation in the Field of Artificial Intelligence
Ziegler, Wolfgang
Zeitschriftenaufsatz
2020Lattice Boltzmann simulations on irregular grids
Krämer, Andreas; Wilde, Dominik; Küllmer, Knut; Reith, Dirk; Foysi, Holger; Joppich, Wolfgang
Zeitschriftenaufsatz
2020Mathematical Modeling of Alkaline Methanol Oxidation for Design of Efficient Fuel Cells
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa
Konferenzbeitrag
2020A note on £2p-completeness of a robust binary linear program with binary uncertainty set
Claus, M.; Simmoteit, M.
Zeitschriftenaufsatz
2020Optimal multiparametric set-up modelled for best survival outcomes in palliative treatment of liver malignancies
Goldstein, Elisha; Yeghiazaryan, Kristina; Ahmad, Ashar; Giordano, Frank A.; Fröhlich, Holger; Golubnitschaja, Olga
Zeitschriftenaufsatz
2020PathME: Pathway based multi-modal sparse autoencoders for clustering of patient-level multi-omics data
Lemsara, Amina; Ouadfel, Salima; Fröhlich, Holger
Zeitschriftenaufsatz
2020Proposal of an Architecture for Terminology Management in a Research Project
Mora, Sara; Madan, Sumit; Gebel, Stephan; Giacomini, Mauro
Konferenzbeitrag
2020PS4DR: A multimodal workflow for identification and prioritization of drugs based on pathway signatures
Emon, Mohammad Asif; Domingo-Fernandez, Daniel; Tapley Hoyt, Charles; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Pure Functions in C: A Small Keyword for Automatic Parallelization
Süß, T.; Nagel, L.; Vef, M.-A.; Brinkmann, A.; Feld, D.; Soddemann, T.
Zeitschriftenaufsatz
2020SEAweb: The small RNA Expression Atlas web application
Rahman, Raza-Ur; Liebhoff, Anna-Maria; Bansal, Vikas; Fiosins, Maksims; Rajput, Ashish; Sattar, Abdul; Magruder, Daniel S.; Madan, Sumit; Sun, Ting; Gautam, Abhivyakti; Heins, Sven; Liwinski, Timur; Bethune, Jörn; Trenkwalder, Claudia; Fluck, Juliane; Mollenhauer, Brit; Bonn, Stefan
Zeitschriftenaufsatz
2020Semi-Lagrangian lattice Boltzmann method for compressible flows
Wilde, D.; Krämer, A.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2020Simplex stochastic collocation for piecewise smooth functions with kinks
Fuchs, Barbara; Garcke, Jochen
Zeitschriftenaufsatz
2020Solving sorting of rolling stock problems utilizing pseudochain structures in graphs
Dörpinghaus, J.; Schrader, R.
Konferenzbeitrag
2020Systems Toxicology Approach for Testing Chemical Cardiotoxicity in Larval Zebrafish
Li, Roman; Zupanic, Anze; Talikka, Marja; Belcastro, Vincenzo; Madan, Sumit; Dörpinghaus, Jens; Berg, Colette vom; Szostak, Justyna; Martin, Florian; Peitsch, Manuel C.; Hoeng, Julia
Zeitschriftenaufsatz
2020Variational Autoencoder Modular Bayesian Networks for Simulation of Heterogeneous Clinical Study Data
Gootjes-Dreesbach, Luise; Sood, Meemansa; Sahay, Akrishta; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020What identifies a whale by its fluke? On the benefit of interpretable machine learning for whale identification
Kierdorf, J.; Garcke, J.; Behley, J.; Cheeseman, T.; Roscher, R.
Konferenzbeitrag
2019Abstract Decision Engine for Task Scheduling in Linux Based Operating Systems
Sadasivam, S.; Ewering, M.; Schwichtenberg, H.
Konferenzbeitrag
2019Association of single and multiple aneurysms with tobacco abuse: An @neurIST risk analysis
Schatlo, B.; Gautschi, O.P.; Friedrich, C.M.; Ebeling, C.; Jägersberg, M.; Kulscar, Z.; Pereira, V.M.; Schaller, K.; Bijlenga, P.
Zeitschriftenaufsatz
2019BioKEEN: a library for learning and evaluating biological knowledge graph embeddings
Ali, M.; Hoyt, C.T.; Domingo-Fernandez, D.; Lehmann, J.; Jabeen, H.
Zeitschriftenaufsatz
2019Cognitive Systems and Robotics
Bauckhage, Christian; Bauernhansl, Thomas; Beyerer, Jürgen; Garcke, Jochen
Aufsatz in Buch
2019Contribution of syndecans to cellular internalization and fibrillation of amyloid-β(1–42)
Letoha, T.; Hudák, A.; Kusz, E.; Pettkó-Szandtner, A.; Domonkos, I.; Jósvay, K.; Hofmann-Apitius, M.; Szilák, L.
Zeitschriftenaufsatz
2019Deep learning for clustering of multivariate clinical patient trajectories with missing values
Jong, Johann de; Emon, Mohammad Asif; Wu, Ping; Karki, Reagon; Sood, Meemansa; Godard, Patrice; Ahmad, Ashar; Vrooman, Henri; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2019Efficient modeling of internal cracks for Laplace problem by XFEM using Joukowski mapping
Nakasumi, Shogo; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2019The extraction of complex relationships and their conversion to biological expression language (BEL) overview of the BioCreative VI (2017) BEL track
Madan, S.; Szostak, J.; Elayavilli, R.K.; Tsai, R.T.H.; Ali, M.; Qian, L.H.; Rastegar-Mojarad, M.; Hoeng, J.; Fluck, J.
Zeitschriftenaufsatz
2019A fast prediction method for rotor buzz-saw noise based on an analytical approach
Moreau, Antoine; Staggat, Martin; Gscheidle, Christian
Konferenzbeitrag
2019A framework for managing quality of service in cloud computing through service level agreements
Ziegler, Wolfgang
: Yahyapour, Ramin; Grabowski, Jens; Kranzlmüller, Dieter
Dissertation
2019Fraunhofer Institute for Algorithms and Scientific Computing. Annual Report 2018/2019
 
Jahresbericht
2019A geometrical method for low-dimensional representations of simulations
Iza-Teran, R.; Garcke, J.
Zeitschriftenaufsatz
2019The Impact of Pathway Database Choice on Statistical Enrichment Analysis and Predictive Modeling
Mubeen, Sarah; Hoyt, Charles Tapley; Gemünd, André; Hofmann-Apitius, Martin; Fröhlich, Holger; Domingo-Fernandez, Daniel
Zeitschriftenaufsatz
2019An integrative simulation concept for extrusion blow molded plastic bottles
Michels, Patrick; Grommes, Dirk; Oeckerath, Andre; Reith, Dirk; Bruch, Olaf
Zeitschriftenaufsatz
2019Kernel-based stochastic collocation for the random two-phase navier-stokes equations
Griebel, Michael; Rieger, Christian; Zaspel, Peter
Zeitschriftenaufsatz
2019Knowledge Extraction and Applications utilizing Context Data in Knowledge Graphs
Dörpinghaus, Jens; Stefan, Andreas
Konferenzbeitrag
2019MCMC Techniques for Parameter Estimation of ODE Based Models in Systems Biology
Valderrama-Bahamóndez, Gloria I.; Fröhlich, Holger
Zeitschriftenaufsatz
2019Meshfree methods for partial differential equations IX
: Griebel, Michael; Schweitzer, Marc Alexander
Tagungsband
2019A Minimum Set-Cover Problem with several constraints
Dörpinghaus, Jens; Düing, Carsten; Weil, Vera
Konferenzbeitrag
2019Model Reduction in the Design of Alkaline Methanol Fuel Cells
Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa
Konferenzbeitrag
2019Optimally rotated coordinate systems for adaptive least-squares regression on sparse grids
Bohn, Bastian; Griebel, Michael; Oettershagen, Jens
Konferenzbeitrag
2019PathMe: Merging and exploring mechanistic pathway knowledge
Domingo-Fernandez, D.; Mubeen, S.; Marín-Llaó, J.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019Predicting Missing Links Using PyKEEN
Ali, Mehdi; Hoyt, Charles Tapley; Domingo-Fernandez, Daniel; Lehmann, Jens
Konferenzbeitrag
2019PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine
Gonzalez-Hernandez, G.; Lu, Z.Y.; Leaman, R.; Weissenbacher, D.; Boland, M.R.; Chen, Y.; Du, J.C.; Fluck, J.; Greene, C.S.; Holmes, J.; Kashyap, A.; Nielsen, R.L.; Ouyang, Z.Q.; Schaaf, S.; Taroni, J.N.; Tao, C.; Zhang, Y.P.; Liu, H.F.
Konferenzbeitrag
2019Pseudoentropic derivation of the regularized lattice Boltzmann method
Krämer, A.; Wilde, D.; Küllmer, K.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2019PTSD Biomarker Database: Deep Dive Metadatabase for PTSD Biomarkers, Visualizations and Analysis Tools
Domingo-Fernandez, Daniel; Provost, Allison; Kodamullil, Alpha Tom; Marín-Llaó, Josep; Lasseter, Heather; Diaz, Kristophe; Daskalakis, Nikolaos P.; Lancashire, Lee; Hofmann-Apitius, Martin; Haas, Magali
Zeitschriftenaufsatz
2019Publisher Correction: ComPath: An ecosystem for exploring, analyzing, and curating mappings across pathway databases (vol 4, 43, 2018)
Domingo-Fernandez, D.; Hoyt, C.T.; Bobis-Alvarez, C.; Marin-Llao, J.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019Quantifying mechanisms in neurodegenerative diseases (NDDs) using candidate mechanism perturbation amplitude (CMPA) algorithm
Karki, R.; Kodamullil, A.T.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019RatVec: A General Approach for Low-dimensional Distributed Vector Representations via Rational Kernels
Brito, Eduardo; Georgiev, Bogdan; Domingo-Fernández, Daniel; Hoyt, Charles Tapley; Bauckhage, Christian
Konferenzbeitrag
2019Re-curation and rational enrichment of knowledge graphs in Biological Expression Language
Hoyt, C.T.; Domingo-Fernández, D.; Aldisi, R.; Xu, L.; Kolpeja, K.; Spalek, S.; Wollert, E.; Bachman, J.; Gyori, B.M.; Greene, P.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019A Representer Theorem for Deep Kernel Learning
Bohn, Bastian; Rieger, Christian; Griebel, Michael
Zeitschriftenaufsatz
2019Scalable Linear Solvers for Computational Material Design of Filled Rubbers
Hülsmann, Gösta; Kechel, Arnold; Plum, Hans-Joachim; Schweitzer, Marc Alexander; Hu, Wei; Wu, C.T.; Koishi, Masataka
Abstract
2019Simulation of micron-scale drop impact
Griebel, Michael; Klitz, Margrit
Zeitschriftenaufsatz
2019Singular value decomposition versus sparse grids: Refined complexity estimates
Griebel, Michael; Harbrecht, Helmut
Zeitschriftenaufsatz
2019System-AMG for Fully Coupled Reservoir Simulation with Geomechanics
Gries, Sebastian; Metsch, Bram; Tomin, Pavel; Terekhov, Kirill M.
Konferenzbeitrag
2019Topological Reduction of Gas Transport Networks
Baldin, Anton; Clees, Tanja; Fuchs, Barbara; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Torgovitskaia, Inna
Konferenzbeitrag