Fraunhofer-Gesellschaft

Publica

Hier finden Sie wissenschaftliche Publikationen aus den Fraunhofer-Instituten.
2021ANMerge: A Comprehensive and Accessible Alzheimer’s Disease Patient-Level Dataset
Birkenbihl, Colin; Westwood, Sarah; Shi, Liu; Nevado-Holgado, Alejo; Westman, Eric; Lovestone, Simon; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2021Bridging Scales in Alzheimer's Disease: Biological Framework for Brain Simulation With The Virtual Brain
Stefanovski, L.; Meier, J.M.; Pai, R.K.; Triebkorn, P.; Lett, T.; Martin, L.; Bülau, K.; Hofmann-Apitius, M.; Solodkin, A.; McIntosh, A.R.; Ritter, P.
Review
2021Calibration of the Heston stochastic local volatility model: A finite volume scheme
Engelmann, Bernd; Koster, Frank; Oeltz, Daniel
Zeitschriftenaufsatz
2021Caution, "normal" BMI: Health risks associated with potentially masked individual underweight - EPMA Position Paper 2021
Golubnitschaja, Olga; Liskova, A.; Koklesova, L.; Samec, M.; Biringer, K.; Büsselberg, D.; Podbielska, H.; Kunin, A.A.; Evsevyeva, M.E.; Shapira, N.; Paul, F.; Erb, C.; Dietrich, D.E.; Felbel, D.; Karabatsiakis, A.; Bubnov, R.; Polivka, J.; Polivka, J.; Birkenbihl, C.; Fröhlich, Holger; Hofmann-Apitius, M.; Kubatka, P.
Zeitschriftenaufsatz
2021CLEP: A hybrid data- and knowledge-driven framework for generating patient representations
Bharadhwaj, Vinay Srinivas; Ali, Mehdi; Birkenbihl, Colin; Mubeen, Sarah; Lehmann, Jens; Hofmann-Apitius, Martin; Hoyt, Charles Tapley; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2021Converting disease maps into heavyweight ontologies: General methodology and application to Alzheimer's disease
Henry, V.; Moszer, I.; Dameron, O.; Vila Xicota, L.; Dubois, B.; Potier, M.-C.; Hofmann-Apitius, M.; Colliot, O.
Zeitschriftenaufsatz
2021COVID-19 Knowledge Graph: A computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology
Domingo-Fernández, Daniel; Baksi, Shounak; Schultz, Bruce; Gadiya, Yojana; Kark, Reagon; Raschka, Tamara; Ebeling, Christian; Hofmann-Apitius, Martin; Kodamullil, Alpha Tom
Zeitschriftenaufsatz
2021COVID-19 preVIEW: Semantic Search to Explore COVID-19 Research Preprints
Langnickel, L.; Baum, R.; Darms, J.; Madan, S.; Fluck, J.
Konferenzbeitrag
2021Cubature rules for weakly and fully compressible off-lattice Boltzmann methods
Wilde, D.; Krämer, A.; Bedrunka, M.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2021DecoPath: A web application for decoding pathway enrichment analysis
Mubeen, Sarah; Bharadhwaj, Vinay; Gadiya, Yojana; Hofmann-Apitius, Martin; Kodamullil, Alpha; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2021Deletion of Alzheimer's disease-associated CD33 results in an inflammatory human microglia phenotype
Wißfeld, Jannis; Nozaki, Ichiro; Mathews, Mona; Raschka, Tamara; Ebeling, Christian; Hornung, Veit; Brüstle, Oliver; Neumann, Harald
Zeitschriftenaufsatz
2021Efficient method for simulation of long-distance gas transport networks with large amounts of hydrogen injection
Clees, T.; Baldin, A.; Klaassen, B.; Nikitina, L.; Nikitin, I.; Spelten, P.
Zeitschriftenaufsatz
2021Entropy Numbers of Finite Dimensional Mixed-Norm Balls and Function Space Embeddings with Small Mixed Smoothness
Mayer, S.; Ullrich, T.
Zeitschriftenaufsatz
2021An Explainable Multimodal Neural Network Architecture for Predicting Epilepsy Comorbidities Based on Administrative Claims Data
Linden, Thoma; Jong, J. de; Lu, C.; Kiri, V.; Haeffs, K.; Fröhlich, H.
Zeitschriftenaufsatz
2021Fault Detection in Uni-Directional Tape Production Using Image Processing
Devagekar, S.; Delforouzi, A.; Plöger, P.G.
Konferenzbeitrag
2021Identifying multimodal signatures underlying the somatic comorbidity of psychosis: The COMMITMENT roadmap
Schwarz, Emanuel; Alnæs, Dag; Andreassen, Ole A.; Cao, Han; Chen, Junfang; Degenhardt, Franziska; Doncevic, Daria; Dwyer, Dominic; Eils, Roland; Erdmann, Jeanette; Herrmann, Carl; Hofmann-Apitius, Martin; Kaufmann, Tobias; Koutsouleris, Nikolaos; Kodamullil, Alpha Tom; Khuntia, Adyasha; Mucha, Sören; Nöthen, Markus M.; Paul, Riya; Pedersen, Mads L.; Quintero, Andres; Schunkert, Heribert; Sharma, Ashwini; Tost, Heike; Westlye, Lars T.; Zhang, Youcheng; Meyer-Lindenberg, Andreas
Editorial
2021Inlinetauglichkeit von zerstörungsfreien Prüfmethoden für den digitalen Zwilling von thermoplastischen Carbonfaser-Tapes
Koster, Dirk; Summa, Jannik; Jungmann, Christian; Rabe, Ute; Herrmann, Hans-Georg; Link, Tobias; John, Marianne; Nagel, Frank; Schlimper, Ralf; Delforouzi, Ahmad; Roggenbuck, Josef; Wolf, Klaus
Konferenzbeitrag
2021Linking COVID-19 and Heme-Driven Pathophysiologies: A Combined Computational-Experimental Approach
Hopp, Marie-Thérèse; Domingo-Fernández, Daniel; Gadiya, Yojana; Detzel, Milena; Graf, Regina; Schmalohr Benjamin; Kodamullil, Alpha Tom; Imhof, Diana; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2021Mathematical modeling and visualization of topologically non-trivial solutions in general relativity
Nikitin, I.
Konferenzbeitrag
2021A method for the rational selection of drug repurposing candidates from multimodal knowledge harmonization
Schultz, B.; Zaliani, A.; Ebeling, C.; Reinshagen, J.; Bojkova, D.; Lage-Rupprecht, V.; Karki, R.; Lukassen, S.; Gadiya, Y.; Ravindra, N.G.; Das, S.; Baksi, S.; Domingo-Fernandez, D.; Lentzen, M.; Strivens, M.; Raschka, T.; Cinatl, J.; DeLong, L.N.; Gribbon, P.; Geisslinger, G.; Ciesek, S.; Dijk, D. van; Gardner, S.; Kodamullil, A.T.; Fröhlich, H.; Peitsch, M.; Jacobs, M.; Hoeng, J.; Eils, R.; Claussen, C.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2021MultiPaths. A python framework for analyzing multi-layer biological networks using diffusion algorithms
Marín-Llaó, Josep; Mubeen, Sarah; Perera-Lluna, Alexandre; Hofmann-Apitius, Martin; Picart-Armada, Sergio; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2021NFDI4Health - Nationale Forschungsdateninfrastruktur für personenbezogene Gesundheitsdaten
Fluck, J.; Lindstädt, B.; Ahrens, W.; Beyan, O.; Buchner, B.; Darms, J.; Depping, R.; Dierkes, J.; Neuhausen, H.; Müller, W.; Zeeb, H.; Golebiewski, M.; Löffler, M.; Löbe, M.; Meineke, F.; Klammt, S.; Fröhlich, Holger; Hahn, H.; Schulze, M.; Pischon, T.; Nöthlings, U.; Sax, U.; Kusch, H.; Grabenhenrich, L.; Schmidt, C.O.; Waltemath, D.; Semler, S.; Gehrke, J.; Kirsten, T.; Praßer, F.; Thun, S.; Wieler, L.; Pigeot, I.
Zeitschriftenaufsatz
2021On dark stars, galactic rotation curves and fast radio bursts
Nikitin, I.
Konferenzbeitrag
2021Pure Functions in C: A Small Keyword for Automatic Parallelization
Süß, T.; Nagel, L.; Vef, M.-A.; Brinkmann, A.; Feld, D.; Soddemann, T.
Zeitschriftenaufsatz
2021Remote monitoring technologies in Alzheimer's disease: Design of the RADAR-AD study
Muurling, M.; Boer, C. de; Kozak, R.; Religa, D.; Koychev, I.; Verheij, H.; Nies, V.J.M.; Duyndam, A.; Sood, M.; Fröhlich, H.; Hannesdottir, K.; Erdemli, G.; Lucivero, F.; Lancaster, C.; Hinds, C.; Stravopoulos, T.G.; Nikolopoulos, S.; Kompatsiaris, I.; Manyakov, N.V.; Owens, A.P.; Narayan, V.A.; Aarsland, D.; Visser, P.J.
Zeitschriftenaufsatz
2021SEEDS: Data driven inference of structural model errors and unknown inputs for dynamic systems biology
Newmiwaka, Tobias; Engelhardt, Benjamin; Wendland, Philipp; Kahl, Dominik; Fröhlich, Holger; Kschischo, Maik
Zeitschriftenaufsatz
2021A Systems Biology Approach for Hypothesizing the Effect of Genetic Variants on Neuroimaging Features in Alzheimer’s Disease
Golriz Khatami, Sepehr; Domingo-Fernandez, D.; Mubeen, S.; Hoyt, C.T.; Robinson, C.; Karki, R.; Iyappan, A.; Kodamullil, A.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2021Towards a global investigation of transcriptomic signatures through co-expression networks and pathway knowledge for the identification of disease mechanisms
Figueiredo, Rebeca Quiroz; Raschka, Tamara; Kodamullil, Alpha Tom; Hofmann-Apitius, Martin; Mubeen, Sarah; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2021Towards realizing the vision of precision medicine: AI based prediction of clinical drug response
Jong, Johann de; Cutcutache, Ioana; Page, Matthew; Elmoufti, Sami; Dilley, Cynthia; Fröhlich, Holger; Armstrong, Martin
Zeitschriftenaufsatz
2021Unraveling the heterogeneity in Alzheimer's disease progression across multiple cohorts and the implications for data-driven disease modeling
Birkenbihl, Colin; Salimi, Yasamin; Fröhlich, Holger
Zeitschriftenaufsatz
2021Utilizing Minimum Set-Cover Structures with Several Constraints for Knowledge Discovery on Large Literature Databases
Dörpinghaus, J.; Düing, C.; Weil, V.
Konferenzbeitrag
2021Zerstörungsfreie Prüfmethoden zur Merkmalsextraktion für den digitalen Zwilling der Thermoplast-Composite Wertschöpfungskette
Summa, Jannik; Rabe, Ute; Pudovikov, Sergey; Jungmann, Christian; Koster, Dirk; Herrmann, Hans-Georg; Link, Tobias; John, Marianne; Nagel, Frank; Schlimper, Ralf; Delforouzi, Ahmad; Roggenbuck, Josef; Wolf, Klaus
Konferenzbeitrag
2020Algebraic multigrid for the finite pointset method
Metsch, B.; Nick, F.; Kuhnert, J.
Zeitschriftenaufsatz
2020Algebraic Wavefront Parallelization for ILU(0) Smoothing in Reservoir Simulation
Gries, Sebastian
Konferenzbeitrag
2020Analysis and Prediction of Deforming 3D Shapes using Oriented Bounding Boxes and LSTM Autoencoders
Hahner, Sara; Iza-Teran, Rodrigo; Garcke, Jochen
Konferenzbeitrag
2020Application cases of biological transformation in manufacturing technology
Bergs, T.; Schwaneberg, U.; Barth, S.; Hermann, L.; Grunwald, T.; Mayer, S.; Biermann, F.; Sözer, N.
Zeitschriftenaufsatz
2020Automatic analysis of crash simulations with dimensionality reduction algorithms such as PCA and t-SNE
Kracker, David; Garcke, Jochen; Schumacher, Axel; Schwanitz, P.
Konferenzbeitrag
2020Challenges of Integrative Disease Modeling in Alzheimer's Disease
Golriz Khatami, Sepehr; Robinson, C.; Birkenbihl, C.; Domingo-Fernandez, D.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2020Clustering of Alzheimer's and Parkinson's disease based on genetic burden of shared molecular mechanisms
Emon, Mohammad Asif; Heinson, Ashley; Wu, Ping; Domingo-Fernández, Daniel; Sood, Meemansa; Vrooman, Henri; Corvol, Christophe; Scordis, Phil; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Combining Machine Learning and Simulation to a Hybrid Modelling Approach: Current and Future Directions
Rüden, Laura von; Mayer, Sebastian; Sifa, Rafet; Bauckhage, Christian; Garcke, Jochen
Konferenzbeitrag
2020A Compact Spectral Descriptor for Shape Deformations
Sible, Skylar; Iza-Teran, Rodrigo; Garcke, Jochen; Aulig, Nikola; Wollstadt, Patricia
Konferenzbeitrag
2020Comprehensive analysis of tumor necrosis factor receptor TNFRSF9 (4-1BB) DNA methylation with regard to molecular and clinicopathological features, immune infiltrates, and response prediction to immunotherapy in melanoma
Fröhlich, A.; Loick, S.; Bawden, E.G.; Fietz, S.; Dietrich, J.; Diekmann, E.; Saavedra, G.; Fröhlich, H.; Niebel, D.; Sirokay, J.; Zarbl, R.; Gielen, G.H.; Kristiansen, G.; Bootz, F.; Landsberg, J.; Dietrich, D.
Zeitschriftenaufsatz
2020A Computational Approach for Mapping Heme Biology in the Context of Hemolytic Disorders
Humayun, Farah; Domingo-Fernández, Daniel; Abisheck Paul George, Ajay; Hopp, Marie-Thérèse; Syllwasschy, Benjamin; Detzel, Milena; Tapley Hoyt, Charles; Hofmann-Apitius, Martin; Imhof, Diana
Zeitschriftenaufsatz
2020Corrigendum: The Impact of Pathway Database Choice on Statistical Enrichment Analysis and Predictive Modeling
Mubeen, S.; Tapley Hoyt, C.; Gemünd, A.; Hofmann-Apitius, M.; Fröhlich, H.; Domingo-Fernandez, D.
Zeitschriftenaufsatz
2020The COVID-19 Ontology
Sargsyan, Astghik; Kodamullil, Alpha Tom; Baksi, Shounak; Darms, Johannes; Madan, Sumit; Gebel, Stephan; Keminer, Oliver; Jose, Geena Mariya; Balabin, Helena; DeLong, Lauren Nicole; Kohler, Manfred; Jacobs, Marc; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020CTO: A community-based clinical trial ontology and its applications in PubChemRDF and SCAIView
Lin, A.Y.; Gebel, S.; Li, Q.L.; Madan, S.; Darms, J.; Bolton, E.; Smith, B.; Hofmann-Apitius, M.; He, Y.O.; Kodamullil, A.T.
Konferenzbeitrag
2020Data science in neurodegenerative disease
Golriz Khatami, Sepehr; Mubeen, S.; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Data-Driven Modeling of Knowledge Assemblies in Understanding Comorbidity Between Type 2 Diabetes Mellitus and Alzheimer’s Disease
Karki, Reagon; Madan, Sumit; Gadiya, Yojana; Domingo-Fernandez, Daniel; Kodamullil, Alpha Tom; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Determination of relevant mechanical properties for the production process of polyethylene by using mesoscale molecular simulation techniques
Grommes, D.; Reith, D.
Zeitschriftenaufsatz
2020Differences in cohort study data affect external validation of artificial intelligence models for predictive diagnostics of dementia - lessons for translation into clinical practice
Birkenbihl, Colin; Emon, Mohammad Asif; Vrooman, Henri; Westwood, Sarah; Lovestone, Simon; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Drug repositioning of antiretroviral ritonavir for combinatorial therapy in glioblastoma
Rauschenbach, Laurèl; Wieland, Anja; Reinartz, Roman; Kebir, Sied; Till, Andreas; Darkwah Oppong, Marvin; Dobersalske, Celia; Ullrich, Vivien; Ahmad, Ashar; Jabbarli, Ramazan; Pierscianek, Daniela; Fröhlich, Holger; Simon, Matthias; Brüstle, Oliver; Sure, Ulrich; Glas, Martin; Scheffler, Björn
Zeitschriftenaufsatz
2020Drug2ways: Reasoning over causal paths in biological networks for drug discovery
Rivas-Barragan, Daniel; Mubeen, Sarah; Guim Bernat, Francesc; Hofmann-Apitius, Martin; Domingo-Fernández, Daniel
Zeitschriftenaufsatz
2020Evaluating the Alzheimer's disease data landscape
Birkenbihl, Colin; Salimi, Yasamin; Domingo-Fernandez, Daniel; Lovestone, Simon; Fröhlich, Holger; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Explain it to me - facing remote sensing challenges in the bio- and geosciences with explainable machine learning
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J.
Konferenzbeitrag
2020Explainable Machine Learning for Scientific Insights and Discoveries
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J.
Zeitschriftenaufsatz
2020The future of German MeSH: a new semi-automatic translation process and new services for search and annotation
Langnickel, Lisa; Baum, Roman; Wollnik-Korn, Gabriele; Fischer-Wagener, Brigitte; Madan, Sumit; Fluck, Juliane
Zeitschriftenaufsatz
2020Generalization of algebraic multiscale to algebraic multigrid
Ehrmann, Silvia; Gries, Sebastian; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2020GuiltyTargets: Prioritization of Novel Therapeutic Targets with Deep Network Representation Learning
Muslu, Özlem; Hoyt, Charles Tapley; Lacerda, Mauricio Pio de; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Informed Machine Learning - A Taxonomy and Survey of Integrating Knowledge into Learning Systems
Rüden, Laura von; Mayer, Sebastian; Beckh, Katharina; Georgiev, Bogdan; Giesselbach, Sven; Heese, Raoul; Kirsch, Birgit; Pfrommer, Julius; Pick, Annika; Ramamurthy, Rajkumar; Walczak, Michal; Garcke, Jochen; Bauckhage, Christian; Schuecker, Jannis
Preprint
2020Knowledge Detection and Discovery using Semantic Graph Embeddings on Large Knowledge Graphs generated on Text Mining Results
Dörpinghaus, J.; Jacobs, M.
Konferenzbeitrag
2020A Landscape Analysis of Standardisation in the Field of Artificial Intelligence
Ziegler, Wolfgang
Zeitschriftenaufsatz
2020Lattice Boltzmann simulations on irregular grids
Krämer, Andreas; Wilde, Dominik; Küllmer, Knut; Reith, Dirk; Foysi, Holger; Joppich, Wolfgang
Zeitschriftenaufsatz
2020Local Postsynaptic Signaling on Slow Time Scales in Reciprocal Olfactory Bulb Granule Cell Spines Matches Asynchronous Release
Ona Jodar, T.; Lage-Rupprecht, V.; Abraham, N.M.; Rose, C.R.; Egger, V.
Zeitschriftenaufsatz
2020Mathematical Modeling of Alkaline Methanol Oxidation for Design of Efficient Fuel Cells
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa
Konferenzbeitrag
2020Multicenter Alzheimer's and Parkinson's disease immune biomarker verification study
Brosseron, Frederic; Kolbe, Carl-Christian; Santarelli, Francesco; Carvalho, Stephanie; Antonell, Anna; Castro-Gomez, Sergio; Tacik, Pawel; Namasivayam, Aishwarya Alex; Mangone, Graziella; Schneider, Reinhard; Latz, Eicke; Wüllner, Ullrich; Svenningsson, Per; Sánchez-Valle, Raquel; Molinuevo, José Luis; Corvol, Jean-Christophe; Heneka, Michael T.; Hofmann-Apitius, Martin; Springstubbe, Stephan; Fröhlich, Holger et al.
Zeitschriftenaufsatz
2020Neural Network Compression via Learnable Wavelet Transforms
Wolter, Moritz; Lin, Shaohui; Yao, Angela
Konferenzbeitrag
2020A note on £2p-completeness of a robust binary linear program with binary uncertainty set
Claus, M.; Simmoteit, M.
Zeitschriftenaufsatz
2020Optimal multiparametric set-up modelled for best survival outcomes in palliative treatment of liver malignancies
Goldstein, Elisha; Yeghiazaryan, Kristina; Ahmad, Ashar; Giordano, Frank A.; Fröhlich, Holger; Golubnitschaja, Olga
Zeitschriftenaufsatz
2020Optimization of Retrieval Algorithms on Large Scale Knowledge Graphs
Dörpinghaus, J.; Stefan, A.
Konferenzbeitrag
2020The origin of the hysteresis in cyclic voltammetric response of alkaline methanol electrooxidation
Haisch, Theresa; Kubannek, Fabian; Nikitina, Lialia; Nikitin, Igor; Pott, Sabine; Clees, Tanja; Krewer, Ulrike
Zeitschriftenaufsatz
2020Parameter Identification and Model Reduction in the Design of Alkaline Methanol Fuel Cells
Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa; Kubannek, Fabian
Zeitschriftenaufsatz
2020PathME: Pathway based multi-modal sparse autoencoders for clustering of patient-level multi-omics data
Lemsara, Amina; Ouadfel, Salima; Fröhlich, Holger
Zeitschriftenaufsatz
2020Presynaptic NMDARs cooperate with local spikes toward GABA release from the reciprocal olfactory bulb granule cell spine
Lage-Rupprecht, V.; Zhou, L.; Bianchini, G.; Aghvami, S.S.; Mueller, M.; Rozsa, B.; Sassoe-Pognetto, M.; Egger, V.
Zeitschriftenaufsatz
2020Proposal of an Architecture for Terminology Management in a Research Project
Mora, Sara; Madan, Sumit; Gebel, Stephan; Giacomini, Mauro
Konferenzbeitrag
2020PS4DR: A multimodal workflow for identification and prioritization of drugs based on pathway signatures
Emon, Mohammad Asif; Domingo-Fernandez, Daniel; Tapley Hoyt, Charles; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2020Quantum Machine Learning. Eine Analyse zu Kompetenz, Forschung und Anwendung
Bauckhage, Christian; Brito, Eduardo; Daase, Inga; Franken, Lukas; Georgiev, Bogdan; Hecker, Dirk; Paschke, Adrian; Piatkowski, Nico; Soddemann, Thomas; Trabold, Daniel
Studie
2020Realistic simulation of virtual multi-scale, multi-modal patient trajectories using Bayesian networks and sparse auto-encoders
Sood, M.; Sahay, A.; Karki, R.; Emon, M.A.; Vrooman, H.; Hofmann-Apitius, M.; Fröhlich, H.
Zeitschriftenaufsatz
2020The recovery of ridge functions on the hypercube suffers from the curse of dimensionality
Doerr, B.; Mayer, S.
Zeitschriftenaufsatz
2020SEAweb: The small RNA Expression Atlas web application
Rahman, Raza-Ur; Liebhoff, Anna-Maria; Bansal, Vikas; Fiosins, Maksims; Rajput, Ashish; Sattar, Abdul; Magruder, Daniel S.; Madan, Sumit; Sun, Ting; Gautam, Abhivyakti; Heins, Sven; Liwinski, Timur; Bethune, Jörn; Trenkwalder, Claudia; Fluck, Juliane; Mollenhauer, Brit; Bonn, Stefan
Zeitschriftenaufsatz
2020Semi-Lagrangian lattice Boltzmann method for compressible flows
Wilde, D.; Krämer, A.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2020Sequence Prediction Using Spectral RNNs
Wolter, Moritz; Gall, Jürgen; Yao, Angela
Konferenzbeitrag
2020Simplex stochastic collocation for piecewise smooth functions with kinks
Fuchs, Barbara; Garcke, Jochen
Zeitschriftenaufsatz
2020Solving sorting of rolling stock problems utilizing pseudochain structures in graphs
Dörpinghaus, J.; Schrader, R.
Konferenzbeitrag
2020Stochastic subspace correction methods and fault tolerance
Griebel, M.; Oswald, P.
Zeitschriftenaufsatz
2020Systems Toxicology Approach for Testing Chemical Cardiotoxicity in Larval Zebrafish
Li, Roman; Zupanic, Anze; Talikka, Marja; Belcastro, Vincenzo; Madan, Sumit; Dörpinghaus, Jens; Berg, Colette vom; Szostak, Justyna; Martin, Florian; Peitsch, Manuel C.; Hoeng, Julia
Zeitschriftenaufsatz
2020Topological Reduction of Stationary Network Problems: Example of Gas Transport
Baldin, Anton; Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia
Zeitschriftenaufsatz
2020Variational Autoencoder Modular Bayesian Networks for Simulation of Heterogeneous Clinical Study Data
Gootjes-Dreesbach, Luise; Sood, Meemansa; Sahay, Akrishta; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2020Voice perturbations under the stress overload in young individuals: Phenotyping and suboptimal health as predictors for cascading pathologies
Kunin, Anatolij; Sargheini, Nafiseh; Birkenbihl, Colin; Moiseeva, Natalia; Fröhlich, Holger; Golubnitschaja, Olga
Zeitschriftenaufsatz
2020What identifies a whale by its fluke? On the benefit of interpretable machine learning for whale identification
Kierdorf, J.; Garcke, J.; Behley, J.; Cheeseman, T.; Roscher, R.
Konferenzbeitrag
2019Abstract Decision Engine for Task Scheduling in Linux Based Operating Systems
Sadasivam, S.; Ewering, M.; Schwichtenberg, H.
Konferenzbeitrag
2019Analysis of Turbulent Flow Data Based on a Spectral Basis Representation
Garcke, J.; Iza Teran, R.; Gscheidle, C.; Berger, L.
Konferenzbeitrag
2019Association of single and multiple aneurysms with tobacco abuse: An @neurIST risk analysis
Schatlo, B.; Gautschi, O.P.; Friedrich, C.M.; Ebeling, C.; Jägersberg, M.; Kulscar, Z.; Pereira, V.M.; Schaller, K.; Bijlenga, P.
Zeitschriftenaufsatz
2019BioKEEN: a library for learning and evaluating biological knowledge graph embeddings
Ali, M.; Hoyt, C.T.; Domingo-Fernandez, D.; Lehmann, J.; Jabeen, H.
Zeitschriftenaufsatz
2019Cognitive Systems and Robotics
Bauckhage, Christian; Bauernhansl, Thomas; Beyerer, Jürgen; Garcke, Jochen
Aufsatz in Buch
2019Contribution of syndecans to cellular internalization and fibrillation of amyloid-β(1–42)
Letoha, T.; Hudák, A.; Kusz, E.; Pettkó-Szandtner, A.; Domonkos, I.; Jósvay, K.; Hofmann-Apitius, M.; Szilák, L.
Zeitschriftenaufsatz
2019Contribution of syndecans to cellular uptake and fibrillation of α-synuclein and tau
Hudák, A.; Kusz, E.; Domonkos, I.; Jósvay, K.; Kodamullil, A.T.; Szilák, L.; Hofmann-Apitius, M.; Letoha, T.
Zeitschriftenaufsatz
2019Converting alzheimer’s disease map into a heavyweight ontology: A formal network to integrate data
Henry, V.; Moszer, I.; Dameron, O.; Potier, M.-C.; Hofmann-Apitius, M.; Colliot, O.
Konferenzbeitrag
2019DARE: A reflective platform designed to enable agile data-driven research on the cloud
Klampanos, I.; Davvetas, A.; Gemünd, A.; Atkinson, M.; Koukourikos, A.; Filgueira, R.; Krause, A.; Spinuso, A.; Charalambidis, A.; Magnoni, F.; Casarotti, E.; Page, C.; Lindner, M.; Ikonomopoulos, A.; Karkaletsis, V.
Konferenzbeitrag
2019Deep learning for clustering of multivariate clinical patient trajectories with missing values
Jong, Johann de; Emon, Mohammad Asif; Wu, Ping; Karki, Reagon; Sood, Meemansa; Godard, Patrice; Ahmad, Ashar; Vrooman, Henri; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2019Efficient modeling of internal cracks for Laplace problem by XFEM using Joukowski mapping
Nakasumi, Shogo; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2019Experimentelle Validierung einer Simulation mit Fluid-Struktur-Interaktion
Brief, Victoria
: Kleinert, Jan
Master Thesis
2019The extraction of complex relationships and their conversion to biological expression language (BEL) overview of the BioCreative VI (2017) BEL track
Madan, S.; Szostak, J.; Elayavilli, R.K.; Tsai, R.T.H.; Ali, M.; Qian, L.H.; Rastegar-Mojarad, M.; Hoeng, J.; Fluck, J.
Zeitschriftenaufsatz
2019A fast prediction method for rotor buzz-saw noise based on an analytical approach
Moreau, Antoine; Staggat, Martin; Gscheidle, Christian
Konferenzbeitrag
2019A framework for managing quality of service in cloud computing through service level agreements
Ziegler, Wolfgang
: Yahyapour, Ramin; Grabowski, Jens; Kranzlmüller, Dieter
Dissertation
2019Fraunhofer Institute for Algorithms and Scientific Computing. Annual Report 2018/2019
 
Jahresbericht
2019A geometrical method for low-dimensional representations of simulations
Iza-Teran, R.; Garcke, J.
Zeitschriftenaufsatz
2019Global-local enrichments in PUMA
Birner, M.; Schweitzer, M.A.
Konferenzbeitrag
2019The Impact of Pathway Database Choice on Statistical Enrichment Analysis and Predictive Modeling
Mubeen, Sarah; Hoyt, Charles Tapley; Gemünd, André; Hofmann-Apitius, Martin; Fröhlich, Holger; Domingo-Fernandez, Daniel
Zeitschriftenaufsatz
2019An integrative simulation concept for extrusion blow molded plastic bottles
Michels, Patrick; Grommes, Dirk; Oeckerath, Andre; Reith, Dirk; Bruch, Olaf
Zeitschriftenaufsatz
2019The KEEN Universe. An Ecosystem for Knowledge Graph Embeddings with a Focus on Reproducibility and Transferability
Ali, M.; Jabeen, H.; Hoyt, C.T.; Lehmann, J.
Konferenzbeitrag
2019Kernel-based stochastic collocation for the random two-phase navier-stokes equations
Griebel, Michael; Rieger, Christian; Zaspel, Peter
Zeitschriftenaufsatz
2019Knowledge Extraction and Applications utilizing Context Data in Knowledge Graphs
Dörpinghaus, Jens; Stefan, Andreas
Konferenzbeitrag
2019MCMC Techniques for Parameter Estimation of ODE Based Models in Systems Biology
Valderrama-Bahamóndez, Gloria I.; Fröhlich, Holger
Zeitschriftenaufsatz
2019Meshfree methods for partial differential equations IX
: Griebel, Michael; Schweitzer, Marc Alexander
Tagungsband
2019A Minimum Set-Cover Problem with several constraints
Dörpinghaus, Jens; Düing, Carsten; Weil, Vera
Konferenzbeitrag
2019Model Reduction in the Design of Alkaline Methanol Fuel Cells
Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa
Konferenzbeitrag
2019Optimally rotated coordinate systems for adaptive least-squares regression on sparse grids
Bohn, Bastian; Griebel, Michael; Oettershagen, Jens
Konferenzbeitrag
2019Parallel detection of subsystems in linear systems arising in the MESHFREE finite pointset method
Nick, F.; Plum, H.-J.; Kuhnert, J.
Konferenzbeitrag
2019PathMe: Merging and exploring mechanistic pathway knowledge
Domingo-Fernandez, D.; Mubeen, S.; Marín-Llaó, J.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019Predicting Missing Links Using PyKEEN
Ali, Mehdi; Hoyt, Charles Tapley; Domingo-Fernandez, Daniel; Lehmann, Jens
Konferenzbeitrag
2019PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine
Gonzalez-Hernandez, G.; Lu, Z.Y.; Leaman, R.; Weissenbacher, D.; Boland, M.R.; Chen, Y.; Du, J.C.; Fluck, J.; Greene, C.S.; Holmes, J.; Kashyap, A.; Nielsen, R.L.; Ouyang, Z.Q.; Schaaf, S.; Taroni, J.N.; Tao, C.; Zhang, Y.P.; Liu, H.F.
Konferenzbeitrag
2019Pseudoentropic derivation of the regularized lattice Boltzmann method
Krämer, A.; Wilde, D.; Küllmer, K.; Reith, D.; Foysi, H.
Zeitschriftenaufsatz
2019PTSD Biomarker Database: Deep Dive Metadatabase for PTSD Biomarkers, Visualizations and Analysis Tools
Domingo-Fernandez, Daniel; Provost, Allison; Kodamullil, Alpha Tom; Marín-Llaó, Josep; Lasseter, Heather; Diaz, Kristophe; Daskalakis, Nikolaos P.; Lancashire, Lee; Hofmann-Apitius, Martin; Haas, Magali
Zeitschriftenaufsatz
2019Publisher Correction: ComPath: An ecosystem for exploring, analyzing, and curating mappings across pathway databases (vol 4, 43, 2018)
Domingo-Fernandez, D.; Hoyt, C.T.; Bobis-Alvarez, C.; Marin-Llao, J.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019Quantifying mechanisms in neurodegenerative diseases (NDDs) using candidate mechanism perturbation amplitude (CMPA) algorithm
Karki, R.; Kodamullil, A.T.; Hoyt, C.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019RatVec: A General Approach for Low-dimensional Distributed Vector Representations via Rational Kernels
Brito, Eduardo; Georgiev, Bogdan; Domingo-Fernández, Daniel; Hoyt, Charles Tapley; Bauckhage, Christian
Konferenzbeitrag
2019Re-curation and rational enrichment of knowledge graphs in Biological Expression Language
Hoyt, C.T.; Domingo-Fernández, D.; Aldisi, R.; Xu, L.; Kolpeja, K.; Spalek, S.; Wollert, E.; Bachman, J.; Gyori, B.M.; Greene, P.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019A Representer Theorem for Deep Kernel Learning
Bohn, Bastian; Rieger, Christian; Griebel, Michael
Zeitschriftenaufsatz
2019Scalable Linear Solvers for Computational Material Design of Filled Rubbers
Hülsmann, Gösta; Kechel, Arnold; Plum, Hans-Joachim; Schweitzer, Marc Alexander; Hu, Wei; Wu, C.T.; Koishi, Masataka
Konferenzbeitrag
2019Semantic knowledge graph embeddings for biomedical research: data integration using linked open data
Dörpinghaus, J.; Jacobs, M.
Konferenzbeitrag
2019Simulation of micron-scale drop impact
Griebel, Michael; Klitz, Margrit
Zeitschriftenaufsatz
2019Singular value decomposition versus sparse grids: Refined complexity estimates
Griebel, Michael; Harbrecht, Helmut
Zeitschriftenaufsatz
2019Stable and efficient quantum mechanical calculations with PUMA on triclinic lattices
Albrecht, C.; Klaar, C.; Schweitzer, M.A.
Konferenzbeitrag
2019System-AMG for Fully Coupled Reservoir Simulation with Geomechanics
Gries, Sebastian; Metsch, Bram; Tomin, Pavel; Terekhov, Kirill M.
Konferenzbeitrag
2019Topological Reduction of Gas Transport Networks
Baldin, Anton; Clees, Tanja; Fuchs, Barbara; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Torgovitskaia, Inna
Konferenzbeitrag
2018An Adaptive Multiscale Approach for Electronic Structure Methods
Chinnamsetty, Sambasiva Rao; Griebel, Michael; Hamaekers, Jan
Zeitschriftenaufsatz
2018BEL Commons: An environment for exploration and analysis of networks encoded in Biological Expression Language
Hoyt, Charles Tapley; Domingo-Fernandez, Daniel; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2018BEL2ABM: agent-based simulation of static models in Biological Expression Language
Gündel, Michaela; Hoyt, Charles Tapley; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2018ComPath: An ecosystem for exploring, analyzing, and curating mappings across pathway databases
Domingo-Fernández, D.; Hoyt, C.T.; Bobis-Álvarez, C.; Marín-Llaó, J.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2018Coupling of Magnetothermal and Mechanical Superconducting Magnet Models by Means of Mesh-Based Interpolation
Maciejewski, M.; Bayrasy, P.; Wolf, K.; Wilczek, M.; Auchmann, B.; Griesemer, T.; Bortot, L.; Prioli, M.; Navarro, A.M.F.; Schöps, S.; Garcia, I.C.; Verweij, A.P.
Zeitschriftenaufsatz
2018ε-dimension in infinite dimensional hyperbolic cross approximation and application to parametric elliptic PDEs
Dũng, Dinh; Griebel, Michael; Huy, Vu Nhat; Rieger, Christian
Zeitschriftenaufsatz
2018Efficiency Improvements of Electrical and Conventional Vehicles
Schmahl, Christoph; Hildebrandt, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2018Efficient Higher Order Time Discretization Schemes For Hamilton–Jacobi–Bellman Equations Based On Diagonally Implicit Symplectic Runge–Kutta Methods
Garcke, Jochen; Kalmykov, Ilja
Aufsatz in Buch
2018Effizienzverbesserungen elektrischer und konventioneller Fahrzeuge
Schmahl, Christoph; Hildebrandt, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2018Der Einfluss von Wirkungsgradverbesserungen im Antriebsstrang auf die Energieeffizienz des Gesamtfahrzeugs - elektrische und konventionelle Antriebssysteme im Vergleich
Schmahl, Christoph; Hildebrandt, Wolfgang; Reith, Dirk
Konferenzbeitrag
2018Event-Triggered Learning for Resource-Efficient Networked Control
Solowjow, Friedrich; Baumann, Dominik; Garcke, Jochen; Trimpe, Sebastian
Konferenzbeitrag
2018Extending PluTo for Multiple Devices by Integrating OpenACC
Süß, T.; Kaya, T.; Feld, D.
Konferenzbeitrag
2018Forming optimisation embedded in a CAE chain to assess and enhance the structural performance of composite components
Kärger, L.; Galkin, S.; Zimmerling, C.; Dörr, D.; Linden, J.; Oeckerath, A.; Wolf, K.
Zeitschriftenaufsatz
2018Graph based discovery in biomedical information systems connecting scientific texts with structured expert knowledge
Dörpinghaus, J.; Jacobs, M.; Fluck, J.
Konferenzbeitrag
2018A graph-theoretic approach to the train marshalling problem
Dörpinghaus, J.; Schrader, R.
Konferenzbeitrag
2018Identification of the kinetics of the alkaline methanol electro-oxidation reaction by dynamic methods
Haisch, T.; Kubannek, F.; Nikitina, L.; Nikitin, I.; Clees, T.; Krewer, U.
Konferenzbeitrag
2018Improving document retrieval with a clustering based relevance feedback system
Darms, J.; Dörpinghaus, J.
Konferenzbeitrag
2018Insights into the Folding of Disulfide-Rich μ-Conotoxins
Ajay Abisheck Paul George; Heimer, Pascal; Maaß, Astrid; Hamaekers, Jan; Hofmann-Apitius, Martin; Biswas, Arijit; Imhof, Diana
Zeitschriftenaufsatz
2018Kognitive Systeme und Robotik
Bauckhage, Christian; Bauernhansl, Thomas; Beyerer, Jürgen; Garcke, Jochen
Aufsatz in Buch
2018Linear solvers for the finite pointset method
Nick, Fabian; Metsch, Bram; Plum, Hans-Joachim
Konferenzbeitrag
2018Making network solvers globally convergent
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia
Konferenzbeitrag
2018Mathematical modeling of electrochemical kinetics of alkaline methanol oxidation
Nikitin, Igor; Clees, Tanja; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Windorfer, Theresa
Zeitschriftenaufsatz
2018Method and computer program for determining a placement of at least one circuit for a reconfigurable logic device
Feld, Dustin; Soddemann, Thomas
Patent
2018Modeling of gas compressors and hierarchical reduction for globally convergent stationary network solvers
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Segiet, Lukasz
Zeitschriftenaufsatz
2018Multi-omic approach decodes paradoxes of the triple-negative breast cancer
Golubnitschaja, O.; Filep, N.; Yeghiazaryan, K.; Blom, H.J.; Hofmann-Apitius, M.; Kuhn, W.
Zeitschriftenaufsatz
2018Multilevel preconditioners for embedded enriched partition of unity approximations
Schweitzer, Marc Alexander; Ziegenhagel, Albert
Zeitschriftenaufsatz
2018Multiscale simulation of polymeric fluids using the sparse grid combination technique
Rüttgers, Alexander; Griebel, Michael
Zeitschriftenaufsatz
2018Numerical Simulation of the Temporal Evolution of a Three Dimensional Barchanoid Dune and the Corresponding Sediment Dynamics
Burkow, Markus; Griebel, Michael
Zeitschriftenaufsatz
2018On the convergence of system-AMG in reservoir simulation
Gries, Sebastian
Zeitschriftenaufsatz
2018On the convergence rate of sparse grid least squares regression
Bohn, B.
Konferenzbeitrag
2018On the decay rate of the singular values of bivariate functions
Griebel, Michael; Li, Guanglian
Zeitschriftenaufsatz
2018Orbital-enriched flat-top partition of unity method for the Schrödinger eigenproblem
Albrecht, Clelia; Klaar, Constanze; Pask, John E.; Schweitzer, Marc Alexander; Sukumar, N.; Ziegenhagel, Albert
Zeitschriftenaufsatz
2018Origin of the hysteresis between forward and reverse peak in cyclic voltammograms of the alkaline methanol electrooxidation
Haisch, T.; Kubannek, F.; Nikitina, L.; Nikitin, I.; Pott, S.; Clees, T.; Krewer, U.
Konferenzbeitrag
2018Parameter identification in cyclic voltammetry of alkaline methanol oxidation
Clees, T.; Nikitin, I.; Nikitina, L.; Pott, S.; Krewer, U.; Haisch, T.
Konferenzbeitrag
2018Parameter identification in electrochemical kinetics of alkaline methanol oxidation
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine
Zeitschriftenaufsatz
2018Pseudostabile Mengen in Graphen
Dörpinghaus, Jens
: Schrader, R.; Randerat, H.
Dissertation
2018PyBEL: A computational framework for biological expression language
Hoyt, Charles Tapley; Konotopez, Andrej; Ebeling, Christian
Zeitschriftenaufsatz
2018Regularized Kernel-Based Reconstruction in Generalized Besov Spaces
Griebel, Michael; Rieger, Christian; Zwicknagl, Barbara
Zeitschriftenaufsatz
2018SCAIView - A semantic search engine for biomedical research utilizing a microservice architecture
Dörpinghaus, J.; Klein, J.; Darms, J.; Madan, S.; Jacobs, M.
Konferenzbeitrag
2018SDA: Towards a novel knowledge discovery model for information systems
Jacobs, M.; Hodapp, S.; Dörpinghaus, J.
Konferenzbeitrag
2018A semantic data integration methodology for translational neurodegenerative disease research
Madan, S.; Fiosins, M.; Bonn, S.; Fluck, J.
Konferenzbeitrag
2018SkaSim - Skalierbare HPC-Software für molekulare Simulationen in der chemischen Industrie
Vrabec, Jadran; Bernreuther, Martin; Bungartz, Hans-Joachim; Chen, Wei-Lin; Cordes, Wilfried; Fingerhut, Robin; Glass, Colin W.; Gmehling, Jürgen; Hamburger, Rene; Heilig, Manfred; Heinen, Matthias; Horsch, Martin T.; Hsieh, Chieh-Ming; Hülsmann, Marco; Jäger, Philip; Klein, Peter; Knauer, Sandra; Köddermann, Thorsten; Köster, Andreas; Langenbach, Kai; Lin, Shiang-Tai; Neumann, Philipp; Rarey, Jürgen; Reith, Dirk; Rutkai, Gabor; Schappals, Michael; Schenk, Martin; Schedemann, Andre; Schönherr, Mandes; Seckler, Steffen; Stephan, Simon; Stöbener, Katrin; Tchipev, Nikola; Wafai, Amer; Werth, Stephan; Hasse, Hans
Zeitschriftenaufsatz
2018Small Alcohols Revisited: CCSD(T) Relative Potential Energies for the Minima, First- and Second-Order Saddle Points, and Torsion-Coupled Surfaces
Kirschner, Karl N.; Heiden, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2018Soft document clustering using a novel graph covering approach
Dörpinghaus, J.; Schaaf, S.; Jacobs, M.
Zeitschriftenaufsatz
2018Stochastic subspace correction in hilbert space
Griebel, Michael; Oswald, Peter
Zeitschriftenaufsatz
2018A systematic approach for identifying shared mechanisms in epilepsy and its comorbidities
Hoyt, Charles Tapley; Domingo-Fernandez, Daniel; Balzer, Nora; Güldenpfennig, Anka; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2018Transition Of Algebraic Multiscale To Algebraic Multigrid
Ehrmann, Silvia; Gries, Sebastian; Schweitzer, Marc Alexander
Konferenzbeitrag
2018Transition point prediction in a multicomponent lattice Boltzmann model: Forcing scheme dependencies
Küllmer, Knut; Krämer, Andreas; Joppich, Wolfgang; Reith, Dirk; Foysi, Holger
Zeitschriftenaufsatz
2018Universal translation algorithm for formulation of transport network problems
Baldin, A.; Cassirer, K.; Clees, T.; Klaassen, B.; Nikitin, I.; Nikitina, L.; Torgovitskaia, I.
Konferenzbeitrag
2018Using Multi-Scale Genetic, Neuroimaging and Clinical Data for Predicting Alzheimer's Disease and Reconstruction of Relevant Biological Mechanisms
Khanna, Shashank; Domingo-Fernández, Daniel; Iyappan, Anandhi; Emon, Mohammad Asif; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2018What was the Question? A Systematization of Information Retrieval and NLP Problems
Dörpinghaus, J.; Darms, J.; Jacobs, M.
Konferenzbeitrag
2017Advanced Mesh-Based and Particle-Based Numerical Methods for Engineering and Applied Mathematics Problems
Wu, Cheng-Tang; Wang, Lihua; Bonello, Bernard; Ling, Leevan; Ma, Ninshu; Schweitzer, Marc Alexander
Editorial
2017Advanced modeling of gas compressors for globally convergent stationary network solvers
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia
Konferenzbeitrag
2017Algebraic Multigrid: From Academia to Industry
Stüben, Klaus; Ruge, John W.; Clees, Tanja; Gries, Sebastian
Aufsatz in Buch
2017Analysis and optimization of flow around flexible wings and blades using the standard co-simulation interface MpCCI
Wirth, Nadja; Bayrasy, Pascal; Landvogt, Bettina; Wolf, Klaus; Cecutti, Francesco; Lewandowski, Tomasz
Aufsatz in Buch
2017Analytical strategy to prioritize Alzheimer's disease candidate genes in gene regulatory networks using public expression data
Kawalia, S.B.; Raschka, T.; Naz, M.; Matos Simoes, R. de; Senger, P.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017The ANOVA decomposition of a non-smooth function of infinitely many variables can have every term smooth
Griebel, M.; Kuo, F.Y.; Sloan, I.H.
Zeitschriftenaufsatz
2017Applying CFD for the Design of an Air-Liquid Interface In-Vitro Testing Method for Inhalable Compounds
Brodbeck, Carsten; Knebel, Jan; Ritter, Detlef; Wolf, Klaus
Aufsatz in Buch
2017ATK-ForceField: a new generation molecular dynamics software package
Schneider, J.; Hamaekers, J.; Chill, S.T.; Smidstrup, S.; Bulin, J.; Thesen, R.; Blom, A.; Stokbro, K.
Zeitschriftenaufsatz
2017Automatic extraction of BEL-statements based on neural networks
Ali, Mehdi; Madan, Sumit; Fischer, Asja; Petzka, Henning; Fluck, Juliane
Konferenzbeitrag
2017Benchmark gas distribution network for cross-sectoral applications
Brosig, C.; Fassbender, S.; Waffenschmidt, E.; Janocha, S.; Klaassen, B.
Konferenzbeitrag
2017Big data and data repurposing - using existing data to answer new questions in vascular dementia research
Doubal, F.N.; Ali, M.; Batty, G.D.; Charidimou, A.; Eriksdotter, M.; Hofmann-Apitius, M.; Kim, Y.-H.; Levine, D.A.; Mead, G.; Mucke, H.A.M.; Ritchie, C.W.; Roberts, C.J.; Russ, T.C.; Stewart, R.; Whiteley, W.; Quinn, T.J.
Zeitschriftenaufsatz
2017The BRSU race academy: A tutored peer-teaching learning approach
Reith, Dirk; Haedecke, Tobias; Schulz, Elena; Langel, Lutz; Gemein, Lukas; Groß, Iris
Konferenzbeitrag
2017Calculation of Chemical Equilibria in Multi-Phase: Multicomponent Systems
Hülsmann, Marco; Klaassen, Bernhard; Krämer, Andreas; Krämer-Fuhrmann, Ottmar; Pangalela, Tosawi; Reith, Dirk; Hack, Klaus; Linden, Johannes
Aufsatz in Buch
2017The cloud4health Project. Secondary use of clinical data with secure cloud-based text mining services
Fluck, Juliane; Senger, Philipp; Ziegler, Wolfgang; Claus, Steffen; Schwichtenberg, Horst
Aufsatz in Buch
2017CLSVOF as a fast and mass-conserving extension of the level-set method for the simulation of two-phase flow problems
Griebel, M.; Klitz, M.
Zeitschriftenaufsatz
2017Comorbidity analysis between alzheimer's disease and type 2 diabetes mellitus (T2DM) based on shared pathways and the role of T2DM drugs
Karki, R.; Kodamullil, A.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017A comprehensive, cell specific microRNA catalogue of human peripheral blood
Juzenas, S.; Venkatesh, G.; Hübenthal, M.; Hoeppner, M.P.; Du, Z.G.; Paulsen, M.; Rosenstiel, P.; Senger, P.; Hofmann-Apitius, M.; Keller, A.; Kupcinskas, L.; Franke, A.; Hemmrich-Stanisak, G.
Zeitschriftenaufsatz
2017Cooling Circuit Simulation I: Modeling
Clees, Tanja; Hornung, Nils; Lluch, Eric; Nikitin, Igor; Nikitina, Lialia; Torgovitskaia, Inna
Aufsatz in Buch
2017Cooling Circuit Simulation II: A Numerical Example
Clees, Tanja; Hornung, Nils; Labrenz, Detlef; Schnell, Michael; Schwichtenberg, Horst; Shoukourian, Hayk; Torgovitskaia, Inna; Wilde, Torsten
Aufsatz in Buch
2017Decomposition of ordinary differential equations
Schwarz, Fritz
Zeitschriftenaufsatz
2017Dimensionality Reduction for the Analysis of Time Series Data from Wind Turbines
Garcke, Jochen; Iza-Teran, Rodrigo; Marks, Marvin; Pathare, Mandar; Schollbach, Dirk; Stettner, Martin
Aufsatz in Buch
2017Document clustering using a graph covering with pseudostable sets
Dörpinghaus, Jens; Schaaf, Sebastian; Fluck, Juliane; Jacobs, Marc
Konferenzbeitrag
2017Electrochemical impedance spectroscopy of alkaline methanol oxidation
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Steffes-lai, Daniela; Pott, Sabine; Krewer, Ulrike; Windorfer, Theresa
Konferenzbeitrag
2017Embedding Enriched Partition of Unity Approximations in Finite Element Simulations
Schweitzer, Marc Alexander; Ziegenhagel, Albert
Konferenzbeitrag
2017Energy-Efficiency and Performance Comparison of Aerosol Optical Depth Retrieval on Distributed Embedded SoC Architectures
Feld, Dustin; Garcke, Jochen; Liu, Jia; Schricker, Eric; Soddemann, Thomas; Xue, Yong
Aufsatz in Buch
2017Error estimates for multivariate regression on discretized function spaces
Bohn, B.; Griebel, M.
Zeitschriftenaufsatz
2017Evaluation of local multiscale approximation spaces for partition of unity methods
Schweitzer, M.A.; Wu, S.
Konferenzbeitrag
2017Extraction of Fragments and Waves After Impact Damage in Particle-Based Simulations
Diehl, Patrick; Bußler, Michael; Pflüger, Dirk; Frey, Steffen; Ertl, Thomas; Sadlo, Filip; Schweitzer, Marc Alexander
Konferenzbeitrag
2017FieldPlacer - A flexible, fast and unconstrained force-directed placement method for heterogeneous reconfigurable logic architectures
Feld, Dustin
Dissertation
2017A framework for managing quality of service in cloud computing through service level agreements
Ziegler, Wolfgang
: Yahyapour, Ramin; Grabowski, Jens; Kranzlmüller, Dieter
Dissertation
2017The Fraunhofer Institute for Algorithms and Scientific Computing SCAI
Trottenberg, Ulrich; Schüller, Anton
Aufsatz in Buch
2017Fraunhofer-Institut für Algorithmen und Wissenschaftliches Rechnen. Jahresbericht 2016/2017
 
Jahresbericht
2017Geometrical Methods for the Analysis of Simulation Bundles
Iza Teran, Victor Rodrigo
Dissertation
2017How to define a spiral tiling?
Klaassen, B.
Zeitschriftenaufsatz
2017Interfacial tension and related properties of ionic liquids in CH4 and CO2 at elevated pressures
Knauer, S.; Schenk, M.R.; Köddermann, T.; Reith, D.; Jaeger, P.
Zeitschriftenaufsatz
2017Knowledge-driven computational modeling in Alzheimer's disease research: Current state and future trends
Geerts, H.; Hofmann-Apitius, M.; Anastasio, T.J.
Zeitschriftenaufsatz
2017Kraftfeldentwicklung für molekulare Simulationen - Einfluss der Auswahl verschiedener Punktladungssätze auf potentielle Energien und ausgewählte thermodynamische Observablen
Schenk, Martin R.; Kirschner, Karl N.; Reith, Dirk
Konferenzbeitrag
2017The LAMA Approach for Writing Portable Applications on Heterogenous Architectures
Brandes, Thomas; Schricker, Eric; Soddemann, Thomas
Aufsatz in Buch
2017LC-GAP: Localized Coulomb Descriptors for the Gaussian Approximation Potential
Barker, James; Bulin, Johannes; Hamaekers, Jan; Mathias, Sonja
Aufsatz in Buch
2017Machine Learning Approaches for Data from Car Crashes and Numerical Car Crash Simulations
Garcke, J.; Iza-Teran, R.
Konferenzbeitrag
2017A Mapping Procedure for the Computation of Flow-Induced Vibrations in Turbomachinery
Wirth, N.; Oeckerath, A.
Aufsatz in Buch
2017Meshfree Methods for Partial Differential Equations VIII
: Griebel, Michael; Schweitzer, Marc Alexander
Tagungsband
2017A method for evaluating a plurality of data aggregations, a method for calibrating a finite element model using measured data points and a method for storing a plurality of simulations
Iza-Teran, Rodrigo; Garcke, Jochen
Patent
2017Methods of Registration of Weak Radio Signals
Klimenko, S.; Klimenko, A.; Konich, K.; Nikitin, I.; Nikitina, L.; Malofeev, V.; Tyul’bashev, S.
Aufsatz in Buch
2017ModelCompare
Garcke, Jochen; Pathare, Mandar; Prabakaran, Nikhil
Aufsatz in Buch
2017Molecular Dynamics Simulation of Membrane Free Energy Profiles Using Accurate Force Field for Ionic Liquids
Köddermann, Thorsten; Schenk, Martin R.; Hülsmann, Marco; Krämer, Andreas; Kirschner, Karl N.; Reith, Dirk
Aufsatz in Buch
2017MpCCI: Neutral Interfaces for Multiphysics Simulations
Wolf, Klaus; Bayrasy, Pascal; Brodbeck, Carsten; Kalmykov, Ilja; Oeckerath, Andre; Wirth, N.
Aufsatz in Buch
2017Multimodal mechanistic signatures for neurodegenerative diseases (NeuroMMSig): A web server for mechanism enrichment
Domingo-Fernández, Daniel; Kodamullil, Alpha Tom; Iyappan, Anandhi; Naz, Mufassra; Emon, Mohammad Asif; Raschka, Tamara; Karki, Reagon; Springstubbe, Stephan; Ebeling, Christian; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Neuroimaging feature terminology: A controlled terminology for the annotation of brain imaging features
Iyappan, A.; Younesi, E.; Redolfi, A.; Vrooman, H.; Khanna, S.; Frisoni, G.B.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017Nonsmooth contact dynamics for the large-scale simulation of granular material
Kleinert, Jan; Simeon, Bernd; Dreßler, Klaus
Zeitschriftenaufsatz
2017Note on "The smoothing effect of integration in R and the ANOVA decomposition''
Griebel, M.; Kuo, F.Y.; Sloan, I.H.
Zeitschriftenaufsatz
2017Novel approaches to develop community-built biological network models for potential drug discovery
Talikka, M.; Bukharov, N.; Hayes, W.S.; Hofmann-Apitius, M.; Alexopoulos, L.; Peitsch, M.C.; Hoeng, J.
Zeitschriftenaufsatz
2017Numerical modeling of relativistic networks
Klimenko, S.; Nikitin, I.; Nikitina, L.; Konich, K.; Reinartz, K.
Zeitschriftenaufsatz
2017Numerical solutions of Einstein field equations with radial dark matter
Klimenko, S.; Nikitin, I.; Nikitina, L.
Zeitschriftenaufsatz
2017The octet rule in chemical space: Generating virtual molecules
Israels, Rafel; Maaß, Astrid; Hamaekers, Jan
Zeitschriftenaufsatz
2017Of mice and men: Comparative analysis of neuro-inflammatory mechanisms in human and mouse using cause-and-effect models
Kodamullil, A.T.; Iyappan, A.; Karki, R.; Madan, S.; Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017On the convergence of system-AMG in reservoir simulation
Gries, S.
Konferenzbeitrag
2017Overview of BEL track: Extraction of complex relationships and their conversion to BEL
Madan, Sumit; Szostak, Justyna; Dörpinghaus, Jens; Hoeng, Julia; Fluck, Juliane
Konferenzbeitrag
2017Parallel Algebraic Multigrid
Plum, Hans-Joachim; Krechel, Arnold; Gries, Sebastian; Metsch, Bram; Nick, Fabian; Schweitzer, Marc Alexander; Stüben, Klaus
Aufsatz in Buch
2017Practical undergraduate projects within the BRSU race academy: An example for conducting a new tutored peer-teaching learning approach
Reith, D.; Haedecke, T.; Schulz, E.; Langel, L.; Gemein, L.; Groß, I.
Konferenzbeitrag
2017Preface
Griebel, M.; Schüller, A.; Schweitzer, M.A.
Aufsatz in Buch
2017Preface
Griebel, M.; Schweitzer, M.A.
Konferenzbeitrag
2017Pure functions in C: A small keyword for automatic parallelization
Süß, Tim; Nagel, Lars; Vef, Marc-Andre; Brinkmann, Andre; Feld, Dustin; Soddemann, Thomas
Konferenzbeitrag
2017Rapid Enriched Simulation Application Development with PUMA
Schweitzer, Marc Alexander; Ziegenhagel, Albert
Aufsatz in Buch
2017Real-time gesture recognition using a particle filtering approach
Li, F.; Köping, L.; Schmitz, S.; Grzegorzek, M.
Konferenzbeitrag
2017Recent improvements of the BEL Information Extraction workFlow (BELIEF) for biomedical text mining and curation
Szostak, Justyna; Madan, Sumit; Hayes, William; Doerpinghaus, Jens; Fluck, Juliane; Talikka, Marja; Peitsch, Manuel C.; Hoeng, Julia
Poster
2017Relative electronic and free energies of octane's unique conformations
Kirschner, Karl N.; Heiden, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2017Reproducing kernel Hilbert spaces for parametric partial differential equations
Griebel, M.; Rieger, C.
Zeitschriftenaufsatz
2017River Bed Morphodynamics: Metamodeling, Reliability Analysis, and Visualization in a Virtual Environment
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Klimenko, Stanislav
Aufsatz in Buch
2017Scientific Computing and Algorithms in Industrial Simulations
: Griebel, Michael; Schüller, Anton; Schweitzer, Marc Alexander
Sammelband
2017Search for and detection of pulsars inmonitoring observations at 111 MHz
Tyul’bashev, S.A.; Tyul’bashev, V.S.; Kitaeva, M.A.; Chernyshova, A.I.; Malofeev, V.M.; Chashei, I.V.; Shishov, V.I.; Dagkesamanskii, R.D.; Klimenko, S.V.; Nikitin, I.N.; Nikitina, L.D.
Zeitschriftenaufsatz
2017Semi-Lagrangian off-lattice Boltzmann method for weakly compressible flows
Krämer, Andreas; Küllmer, Knut; Reith, Dirk; Joppich, Wolfgang; Foysi, Holger
Zeitschriftenaufsatz
2017Stable splittings of Hilbert spaces of functions of infinitely many variables
Griebel, M.; Oswald, P.
Zeitschriftenaufsatz
2017StarWatch 3.0: Visualizing wave patterns of phased array radio telescopes
Klimenko, S.; Konich, K.; Nikitin, I.; Nikitina, L.
Konferenzbeitrag
2017Suboptimal Feedback Control of PDEs by Solving HJB Equations on Adaptive Sparse Grids
Garcke, J.; Kröner, A.
Zeitschriftenaufsatz
2017Systemansätze und -komponenten für cross-sektorale Netze
Doetsch, Christian; Clees, Tanja
Aufsatz in Buch
2017Systematic Analysis of GWAS Data Reveals Genomic Hotspots for Shared Mechanisms between Neurodegenerative Diseases
Naz, Mufassra; Younesi, Erfan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Towards a 21st-century roadmap for biomedical research and drug discovery: Consensus report and recommendations
Langley, G.R.; Adcock, I.M.; Busquet, F.; Crofton, K.M.; Csernok, E.; Giese, C.; Heinonen, T.; Herrmann, K.; Hofmann-Apitius, M.; Landesmann, B.; Marshall, L.J.; McIvor, E.; Muotri, A.R.; Noor, F.; Schutte, K.; Seidle, T.; Stolpe, A. van de; Esch, H. van; Willett, C.; Woszczek, G.
Zeitschriftenaufsatz
2017Trial watch: Tracing investment in drug development for Alzheimer disease
Kodamullil, Alpha Tom; Zekri, Firas; Sood, Meemansa; Hengerer, Bastian; Canard, Luc; McHale, Duncan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Upwind schemes for scalar advection-dominated problems in the discrete exterior calculus
Griebel, Michael; Rieger, Christian; Schier, Alexander
Aufsatz in Buch
2017Using drugs as molecular probes: A computational chemical biology approach in neurodegenerative diseases
Emon, Mohammad Asif; Kodamullil, A.T.; Karki, R.; Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017Visualization of fracture progression in peridynamics
Bußler, M.; Diehl, P.; Pflüger, D.; Frey, S.; Sadlo, F.; Ertl, T.; Schweitzer, M.A.
Zeitschriftenaufsatz