Fraunhofer-Gesellschaft

Publica

Hier finden Sie wissenschaftliche Publikationen aus den Fraunhofer-Instituten.
2019Association of single and multiple aneurysms with tobacco abuse: An @neurIST risk analysis
Schatlo, B.; Gautschi, O.P.; Friedrich, C.M.; Ebeling, C.; Jägersberg, M.; Kulscar, Z.; Pereira, V.M.; Schaller, K.; Bijlenga, P.
Zeitschriftenaufsatz
2019Cognitive Systems and Robotics
Bauckhage, Christian; Bauernhansl, Thomas; Beyerer, Jürgen; Garcke, Jochen
Aufsatz in Buch
2019Contribution of syndecans to cellular internalization and fibrillation of amyloid-β(1–42)
Letoha, T.; Hudák, A.; Kusz, E.; Pettkó-Szandtner, A.; Domonkos, I.; Jósvay, K.; Hofmann-Apitius, M.; Szilák, L.
Zeitschriftenaufsatz
2019Efficient modeling of internal cracks for Laplace problem by XFEM using Joukowski mapping
Nakasumi, Shogo; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2019A fast prediction method for rotor buzz-saw noise based on an analytical approach
Moreau, Antoine; Staggat, Martin; Gscheidle, Christian
Konferenzbeitrag
2019Fraunhofer Institute for Algorithms and Scientific Computing. Annual Report 2018/2019
 
Jahresbericht
2019Generalization of algebraic multiscale to algebraic multigrid
Ehrmann, Silvia; Gries, Sebastian; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2019An integrative simulation concept for extrusion blow molded plastic bottles
Michels, Patrick; Grommes, Dirk; Oeckerath, Andre; Reith, Dirk; Bruch, Olaf
Zeitschriftenaufsatz
2019PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine
Gonzalez-Hernandez, G.; Lu, Z.Y.; Leaman, R.; Weissenbacher, D.; Boland, M.R.; Chen, Y.; Du, J.C.; Fluck, J.; Greene, C.S.; Holmes, J.; Kashyap, A.; Nielsen, R.L.; Ouyang, Z.Q.; Schaaf, S.; Taroni, J.N.; Tao, C.; Zhang, Y.P.; Liu, H.F.
Konferenzbeitrag
2019PTSD Biomarker Database: Deep Dive Metadatabase for PTSD Biomarkers, Visualizations and Analysis Tools
Domingo-Fernandez, Daniel; Provost, Allison; Kodamullil, Alpha Tom; Marín-Llaó, Josep; Lasseter, Heather; Diaz, Kristophe; Daskalakis, Nikolaos P.; Lancashire, Lee; Hofmann-Apitius, Martin; Haas, Magali
Zeitschriftenaufsatz
2019Publisher Correction: ComPath: An ecosystem for exploring, analyzing, and curating mappings across pathway databases (vol 4, 43, 2018)
Domingo-Fernandez, D.; Hoyt, C.T.; Bobis-Alvarez, C.; Marin-Llao, J.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2019Scalable Linear Solvers for Computational Material Design of Filled Rubbers
Hülsmann, Gösta; Kechel, Arnold; Plum, Hans-Joachim; Schweitzer, Marc Alexander; Hu, Wei; Wu, C.T.; Koishi, Masataka
Abstract
2019System-AMG for Fully Coupled Reservoir Simulation with Geomechanics
Gries, Sebastian; Metsch, Bram; Tomin, Pavel; Terekhov, Kirill M.
Konferenzbeitrag
2018An Adaptive Multiscale Approach for Electronic Structure Methods
Chinnamsetty, S.R.; Griebel, M.; Hamaekers, J.
Zeitschriftenaufsatz
2018BEL2ABM: agent-based simulation of static models in Biological Expression Language
Gündel, Michaela; Hoyt, Charles Tapley; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2018Coupling of Magnetothermal and Mechanical Superconducting Magnet Models by Means of Mesh-Based Interpolation
Maciejewski, M.; Bayrasy, P.; Wolf, K.; Wilczek, M.; Auchmann, B.; Griesemer, T.; Bortot, L.; Prioli, M.; Navarro, A.M.F.; Schöps, S.; Garcia, I.C.; Verweij, A.P.
Zeitschriftenaufsatz
2018ε-dimension in infinite dimensional hyperbolic cross approximation and application to parametric elliptic PDEs
Dung, D.; Griebel, M.; Huy, V.N.; Rieger, C.
Zeitschriftenaufsatz
2018Efficiency Improvements of Electrical and Conventional Vehicles
Schmahl, Christoph; Hildebrandt, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2018Efficient Higher Order Time Discretization Schemes For Hamilton–Jacobi–Bellman Equations Based On Diagonally Implicit Symplectic Runge–Kutta Methods
Garcke, Jochen; Kalmykov, Ilja
Aufsatz in Buch
2018Effizienzverbesserungen elektrischer und konventioneller Fahrzeuge
Schmahl, Christoph; Hildebrandt, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2018Der Einfluss von Wirkungsgradverbesserungen im Antriebsstrang auf die Energieeffizienz des Gesamtfahrzeugs - elektrische und konventionelle Antriebssysteme im Vergleich
Schmahl, Christoph; Hildebrandt, Wolfgang; Reith, Dirk
Konferenzbeitrag
2018Event-Triggered Learning for Resource-Efficient Networked Control
Solowjow, Friedrich; Baumann, Dominik; Garcke, Jochen; Trimpe, Sebastian
Konferenzbeitrag
2018Extending PluTo for Multiple Devices by Integrating OpenACC
Süß, T.; Kaya, T.; Feld, D.
Konferenzbeitrag
2018Forming optimisation embedded in a CAE chain to assess and enhance the structural performance of composite components
Kärger, L.; Galkin, S.; Zimmerling, C.; Dörr, D.; Linden, J.; Oeckerath, A.; Wolf, K.
Zeitschriftenaufsatz
2018Graph based discovery in biomedical information systems connecting scientific texts with structured expert knowledge
Dörpinghaus, J.; Jacobs, M.; Fluck, J.
Konferenzbeitrag
2018Identification of the kinetics of the alkaline methanol electro-oxidation reaction by dynamic methods
Haisch, T.; Kubannek, F.; Nikitina, L.; Nikitin, I.; Clees, T.; Krewer, U.
Abstract
2018Improving document retrieval with a clustering based relevance feedback system
Darms, J.; Dörpinghaus, J.
Konferenzbeitrag
2018Insights into the Folding of Disulfide-Rich μ-Conotoxins
Ajay Abisheck Paul George; Heimer, Pascal; Maaß, Astrid; Hamaekers, Jan; Hofmann-Apitius, Martin; Biswas, Arijit; Imhof, Diana
Zeitschriftenaufsatz
2018Kognitive Systeme und Robotik
Bauckhage, Christian; Bauernhansl, Thomas; Beyerer, Jürgen; Garcke, Jochen
Aufsatz in Buch
2018Lattice Boltzmann simulations on irregular grids
Krämer, Andreas; Wilde, Dominik; Küllmer, Knut; Reith, Dirk; Foysi, Holger; Joppich, Wolfgang
Zeitschriftenaufsatz
2018Linear solvers for the finite pointset method
Nick, Fabian; Metsch, Bram; Plum, Hans-Joachim
Konferenzbeitrag
2018Making network solvers globally convergent
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia
Konferenzbeitrag
2018Mathematical modeling of electrochemical kinetics of alkaline methanol oxidation
Nikitin, Igor; Clees, Tanja; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Windorfer, Theresa
Abstract
2018Method and computer program for determining a placement of at least one circuit for a reconfigurable logic device
Feld, Dustin; Soddemann, Thomas
Patent
2018Modeling of gas compressors and hierarchical reduction for globally convergent stationary network solvers
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Segiet, Lukasz
Zeitschriftenaufsatz
2018Multi-omic approach decodes paradoxes of the triple-negative breast cancer
Golubnitschaja, O.; Filep, N.; Yeghiazaryan, K.; Blom, H.J.; Hofmann-Apitius, M.; Kuhn, W.
Zeitschriftenaufsatz
2018Multilevel preconditioners for embedded enriched partition of unity approximations
Schweitzer, Marc Alexander; Ziegenhagel, Albert
Zeitschriftenaufsatz
2018Multiscale simulation of polymeric fluids using the sparse grid combination technique
Rüttgers, A.; Griebel, M.
Zeitschriftenaufsatz
2018Numerical Simulation of the Temporal Evolution of a Three Dimensional Barchanoid Dune and the Corresponding Sediment Dynamics
Burkow, M.; Griebel, M.
Zeitschriftenaufsatz
2018On the convergence of system-AMG in reservoir simulation
Gries, Sebastian
Zeitschriftenaufsatz
2018On the convergence rate of sparse grid least squares regression
Bohn, B.
Konferenzbeitrag
2018On the decay rate of the singular values of bivariate functions
Griebel, Michael; Li, Guanglian
Zeitschriftenaufsatz
2018Orbital-enriched flat-top partition of unity method for the Schrödinger eigenproblem
Albrecht, Clelia; Klaar, Constanze; Pask, John E.; Schweitzer, Marc Alexander; Sukumar, N.; Ziegenhagel, Albert
Zeitschriftenaufsatz
2018Origin of the hysteresis between forward and reverse peak in cyclic voltammograms of the alkaline methanol electrooxidation
Haisch, T.; Kubannek, F.; Nikitina, L.; Nikitin, I.; Pott, S.; Clees, T.; Krewer, U.
Abstract
2018Parameter identification in cyclic voltammetry of alkaline methanol oxidation
Clees, T.; Nikitin, I.; Nikitina, L.; Pott, S.; Krewer, U.; Haisch, T.
Konferenzbeitrag
2018Parameter identification in electrochemical kinetics of alkaline methanol oxidation
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine
Abstract
2018Pseudostabile Mengen in Graphen
Dörpinghaus, Jens
: Schrader, R.; Randerat, H.
Dissertation
2018PyBEL: A computational framework for biological expression language
Hoyt, Charles Tapley; Konotopez, Andrej; Ebeling, Christian
Zeitschriftenaufsatz
2018Regularized Kernel-Based Reconstruction in Generalized {B}esov Spaces
Griebel, M.; Rieger, C.; Zwicknagl, B.
Zeitschriftenaufsatz
2018SCAIView - A semantic search engine for biomedical research utilizing a microservice architecture
Dörpinghaus, J.; Klein, J.; Darms, J.; Madan, S.; Jacobs, M.
Konferenzbeitrag
2018SDA: Towards a novel knowledge discovery model for information systems
Jacobs, M.; Hodapp, S.; Dörpinghaus, J.
Konferenzbeitrag
2018Singular value decomposition versus sparse grids: Refined complexity estimates
Griebel, M.; Harbrecht, H.
Zeitschriftenaufsatz
2018SkaSim - Skalierbare HPC-Software für molekulare Simulationen in der chemischen Industrie
Vrabec, Jadran; Bernreuther, Martin; Bungartz, Hans-Joachim; Chen, Wei-Lin; Cordes, Wilfried; Fingerhut, Robin; Glass, Colin W.; Gmehling, Jürgen; Hamburger, Rene; Heilig, Manfred; Heinen, Matthias; Horsch, Martin T.; Hsieh, Chieh-Ming; Hülsmann, Marco; Jäger, Philip; Klein, Peter; Knauer, Sandra; Köddermann, Thorsten; Köster, Andreas; Langenbach, Kai; Lin, Shiang-Tai; Neumann, Philipp; Rarey, Jürgen; Reith, Dirk; Rutkai, Gabor; Schappals, Michael; Schenk, Martin; Schedemann, Andre; Schönherr, Mandes; Seckler, Steffen; Stephan, Simon; Stöbener, Katrin; Tchipev, Nikola; Wafai, Amer; Werth, Stephan; Hasse, Hans
Zeitschriftenaufsatz
2018Small Alcohols Revisited: CCSD(T) Relative Potential Energies for the Minima, First- and Second-Order Saddle Points, and Torsion-Coupled Surfaces
Kirschner, Karl N.; Heiden, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2018Soft document clustering using a novel graph covering approach
Dörpinghaus, J.; Schaaf, S.; Jacobs, M.
Zeitschriftenaufsatz
2018Stochastic subspace correction in hilbert space
Griebel, M.; Oswald, P.
Zeitschriftenaufsatz
2018A systematic approach for identifying shared mechanisms in epilepsy and its comorbidities
Hoyt, Charles Tapley; Domingo-Fernandez, Daniel; Balzer, Nora; Güldenpfennig, Anka; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2018Transition Of Algebraic Multiscale To Algebraic Multigrid
Ehrmann, Silvia; Gries, Sebastian; Schweitzer, Marc Alexander
Konferenzbeitrag
2018Transition point prediction in a multicomponent lattice Boltzmann model: Forcing scheme dependencies
Küllmer, Knut; Krämer, Andreas; Joppich, Wolfgang; Reith, Dirk; Foysi, Holger
Zeitschriftenaufsatz
2018Universal translation algorithm for formulation of transport network problems
Baldin, A.; Cassirer, K.; Clees, T.; Klaassen, B.; Nikitin, I.; Nikitina, L.; Torgovitskaia, I.
Konferenzbeitrag
2018Using Multi-Scale Genetic, Neuroimaging and Clinical Data for Predicting Alzheimer's Disease and Reconstruction of Relevant Biological Mechanisms
Khanna, Shashank; Domingo-Fernández, Daniel; Iyappan, Anandhi; Emon, Mohammad Asif; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2017Advanced Mesh-Based and Particle-Based Numerical Methods for Engineering and Applied Mathematics Problems
Wu, Cheng-Tang; Wang, Lihua; Bonello, Bernard; Ling, Leevan; Ma, Ninshu; Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2017Advanced modeling of gas compressors for globally convergent stationary network solvers
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia
Konferenzbeitrag
2017Algebraic Multigrid: From Academia to Industry
Stüben, Klaus; Ruge, John W.; Clees, Tanja; Gries, Sebastian
Aufsatz in Buch
2017Analysis and optimization of flow around flexible wings and blades using the standard co-simulation interface MpCCI
Wirth, Nadja; Bayrasy, Pascal; Landvogt, Bettina; Wolf, Klaus; Cecutti, Francesco; Lewandowski, Tomasz
Aufsatz in Buch
2017Analytical strategy to prioritize Alzheimer's disease candidate genes in gene regulatory networks using public expression data
Kawalia, S.B.; Raschka, T.; Naz, M.; Matos Simoes, R. de; Senger, P.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017The ANOVA decomposition of a non-smooth function of infinitely many variables can have every term smooth
Griebel, M.; Kuo, F.Y.; Sloan, I.H.
Zeitschriftenaufsatz
2017Applying CFD for the Design of an Air-Liquid Interface In-Vitro Testing Method for Inhalable Compounds
Brodbeck, Carsten; Knebel, Jan; Ritter, Detlef; Wolf, Klaus
Aufsatz in Buch
2017ATK-ForceField: a new generation molecular dynamics software package
Schneider, J.; Hamaekers, J.; Chill, S.T.; Smidstrup, S.; Bulin, J.; Thesen, R.; Blom, A.; Stokbro, K.
Zeitschriftenaufsatz
2017Automatic extraction of BEL-statements based on neural networks
Ali, Mehdi; Madan, Sumit; Fischer, Asja; Petzka, Henning; Fluck, Juliane
Konferenzbeitrag
2017Benchmark gas distribution network for cross-sectoral applications
Brosig, C.; Fassbender, S.; Waffenschmidt, E.; Janocha, S.; Klaassen, B.
Konferenzbeitrag
2017Big data and data repurposing - using existing data to answer new questions in vascular dementia research
Doubal, F.N.; Ali, M.; Batty, G.D.; Charidimou, A.; Eriksdotter, M.; Hofmann-Apitius, M.; Kim, Y.-H.; Levine, D.A.; Mead, G.; Mucke, H.A.M.; Ritchie, C.W.; Roberts, C.J.; Russ, T.C.; Stewart, R.; Whiteley, W.; Quinn, T.J.
Zeitschriftenaufsatz
2017The BRSU race academy: A tutored peer-teaching learning approach
Reith, Dirk; Haedecke, Tobias; Schulz, Elena; Langel, Lutz; Gemein, Lukas; Groß, Iris
Konferenzbeitrag
2017Calculation of Chemical Equilibria in Multi-Phase: Multicomponent Systems
Hülsmann, Marco; Klaassen, Bernhard; Krämer, Andreas; Krämer-Fuhrmann, Ottmar; Pangalela, Tosawi; Reith, Dirk; Hack, Klaus; Linden, Johannes
Aufsatz in Buch
2017The cloud4health Project. Secondary use of clinical data with secure cloud-based text mining services
Fluck, Juliane; Senger, Philipp; Ziegler, Wolfgang; Claus, Steffen; Schwichtenberg, Horst
Aufsatz in Buch
2017CLSVOF as a fast and mass-conserving extension of the level-set method for the simulation of two-phase flow problems
Griebel, M.; Klitz, M.
Zeitschriftenaufsatz
2017Comorbidity analysis between alzheimer's disease and type 2 diabetes mellitus (T2DM) based on shared pathways and the role of T2DM drugs
Karki, R.; Kodamullil, A.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017A comprehensive, cell specific microRNA catalogue of human peripheral blood
Juzenas, S.; Venkatesh, G.; Hübenthal, M.; Hoeppner, M.P.; Du, Z.G.; Paulsen, M.; Rosenstiel, P.; Senger, P.; Hofmann-Apitius, M.; Keller, A.; Kupcinskas, L.; Franke, A.; Hemmrich-Stanisak, G.
Zeitschriftenaufsatz
2017Cooling Circuit Simulation I: Modeling
Clees, Tanja; Hornung, Nils; Lluch, Eric; Nikitin, Igor; Nikitina, Lialia; Torgovitskaia, Inna
Aufsatz in Buch
2017Cooling Circuit Simulation II: A Numerical Example
Clees, Tanja; Hornung, Nils; Labrenz, Detlef; Schnell, Michael; Schwichtenberg, Horst; Shoukourian, Hayk; Torgovitskaia, Inna; Wilde, Torsten
Aufsatz in Buch
2017Decomposition of ordinary differential equations
Schwarz, Fritz
Zeitschriftenaufsatz
2017Dimensionality Reduction for the Analysis of Time Series Data from Wind Turbines
Garcke, Jochen; Iza-Teran, Rodrigo; Marks, Marvin; Pathare, Mandar; Schollbach, Dirk; Stettner, Martin
Aufsatz in Buch
2017Document clustering using a graph covering with pseudostable sets
Dörpinghaus, Jens; Schaaf, Sebastian; Fluck, Juliane; Jacobs, Marc
Konferenzbeitrag
2017Electrochemical impedance spectroscopy of alkaline methanol oxidation
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Steffes-lai, Daniela; Pott, Sabine; Krewer, Ulrike; Windorfer, Theresa
Konferenzbeitrag
2017Embedding Enriched Partition of Unity Approximations in Finite Element Simulations
Schweitzer, Marc Alexander; Ziegenhagel, Albert
Konferenzbeitrag
2017Energy-Efficiency and Performance Comparison of Aerosol Optical Depth Retrieval on Distributed Embedded SoC Architectures
Feld, Dustin; Garcke, Jochen; Liu, Jia; Schricker, Eric; Soddemann, Thomas; Xue, Yong
Aufsatz in Buch
2017Error estimates for multivariate regression on discretized function spaces
Bohn, B.; Griebel, M.
Zeitschriftenaufsatz
2017Evaluation of local multiscale approximation spaces for partition of unity methods
Schweitzer, M.A.; Wu, S.
Konferenzbeitrag
2017Extraction of Fragments and Waves After Impact Damage in Particle-Based Simulations
Diehl, Patrick; Bußler, Michael; Pflüger, Dirk; Frey, Steffen; Ertl, Thomas; Sadlo, Filip; Schweitzer, Marc Alexander
Konferenzbeitrag
2017FieldPlacer - A flexible, fast and unconstrained force-directed placement method for heterogeneous reconfigurable logic architectures
Feld, Dustin
Dissertation
2017A framework for managing quality of service in cloud computing through service level agreements
Ziegler, Wolfgang
: Yahyapour, Ramin; Grabowski, Jens; Kranzlmüller, Dieter
Dissertation
2017The Fraunhofer Institute for Algorithms and Scientific Computing SCAI
Trottenberg, Ulrich; Schüller, Anton
Aufsatz in Buch
2017Fraunhofer-Institut für Algorithmen und Wissenschaftliches Rechnen. Jahresbericht 2016/2017
 
Jahresbericht
2017Geometrical Methods for the Analysis of Simulation Bundles
Iza Teran, Victor Rodrigo
Dissertation
2017How to define a spiral tiling?
Klaassen, B.
Zeitschriftenaufsatz
2017Interfacial tension and related properties of ionic liquids in CH4 and CO2 at elevated pressures
Knauer, S.; Schenk, M.R.; Köddermann, T.; Reith, D.; Jaeger, P.
Zeitschriftenaufsatz
2017Knowledge-driven computational modeling in Alzheimer's disease research: Current state and future trends
Geerts, H.; Hofmann-Apitius, M.; Anastasio, T.J.
Zeitschriftenaufsatz
2017Kraftfeldentwicklung für molekulare Simulationen - Einfluss der Auswahl verschiedener Punktladungssätze auf potentielle Energien und ausgewählte thermodynamische Observablen
Schenk, Martin R.; Kirschner, Karl N.; Reith, Dirk
Konferenzbeitrag
2017The LAMA Approach for Writing Portable Applications on Heterogenous Architectures
Brandes, Thomas; Schricker, Eric; Soddemann, Thomas
Aufsatz in Buch
2017LC-GAP: Localized Coulomb Descriptors for the Gaussian Approximation Potential
Barker, James; Bulin, Johannes; Hamaekers, Jan; Mathias, Sonja
Aufsatz in Buch
2017Machine Learning Approaches for Data from Car Crashes and Numerical Car Crash Simulations
Garcke, J.; Iza-Teran, R.
Konferenzbeitrag
2017A Mapping Procedure for the Computation of Flow-Induced Vibrations in Turbomachinery
Wirth, N.; Oeckerath, A.
Aufsatz in Buch
2017Meshfree Methods for Partial Differential Equations VIII
: Griebel, Michael; Schweitzer, Marc Alexander
Tagungsband
2017A method for evaluating a plurality of data aggregations, a method for calibrating a finite element model using measured data points and a method for storing a plurality of simulations
Iza-Teran, Rodrigo; Garcke, Jochen
Patent
2017Methods of Registration of Weak Radio Signals
Klimenko, S.; Klimenko, A.; Konich, K.; Nikitin, I.; Nikitina, L.; Malofeev, V.; Tyul’bashev, S.
Aufsatz in Buch
2017ModelCompare
Garcke, Jochen; Pathare, Mandar; Prabakaran, Nikhil
Aufsatz in Buch
2017Molecular Dynamics Simulation of Membrane Free Energy Profiles Using Accurate Force Field for Ionic Liquids
Köddermann, Thorsten; Schenk, Martin R.; Hülsmann, Marco; Krämer, Andreas; Kirschner, Karl N.; Reith, Dirk
Aufsatz in Buch
2017MpCCI: Neutral Interfaces for Multiphysics Simulations
Wolf, Klaus; Bayrasy, Pascal; Brodbeck, Carsten; Kalmykov, Ilja; Oeckerath, Andre; Wirth, N.
Aufsatz in Buch
2017Multimodal mechanistic signatures for neurodegenerative diseases (NeuroMMSig): A web server for mechanism enrichment
Domingo-Fernández, Daniel; Kodamullil, Alpha Tom; Iyappan, Anandhi; Naz, Mufassra; Emon, Mohammad Asif; Raschka, Tamara; Karki, Reagon; Springstubbe, Stephan; Ebeling, Christian; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Neuroimaging feature terminology: A controlled terminology for the annotation of brain imaging features
Iyappan, A.; Younesi, E.; Redolfi, A.; Vrooman, H.; Khanna, S.; Frisoni, G.B.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017Nonsmooth contact dynamics for the large-scale simulation of granular material
Kleinert, Jan; Simeon, Bernd; Dreßler, Klaus
Zeitschriftenaufsatz
2017Note on "The smoothing effect of integration in R and the ANOVA decomposition''
Griebel, M.; Kuo, F.Y.; Sloan, I.H.
Zeitschriftenaufsatz
2017Novel approaches to develop community-built biological network models for potential drug discovery
Talikka, M.; Bukharov, N.; Hayes, W.S.; Hofmann-Apitius, M.; Alexopoulos, L.; Peitsch, M.C.; Hoeng, J.
Zeitschriftenaufsatz
2017Numerical modeling of relativistic networks
Klimenko, S.; Nikitin, I.; Nikitina, L.; Konich, K.; Reinartz, K.
Zeitschriftenaufsatz
2017Numerical solutions of Einstein field equations with radial dark matter
Klimenko, S.; Nikitin, I.; Nikitina, L.
Zeitschriftenaufsatz
2017The octet rule in chemical space: Generating virtual molecules
Israels, Rafel; Maaß, Astrid; Hamaekers, Jan
Zeitschriftenaufsatz
2017Of mice and men: Comparative analysis of neuro-inflammatory mechanisms in human and mouse using cause-and-effect models
Kodamullil, A.T.; Iyappan, A.; Karki, R.; Madan, S.; Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017On the convergence of system-AMG in reservoir simulation
Gries, S.
Konferenzbeitrag
2017Overview of BEL track: Extraction of complex relationships and their conversion to BEL
Madan, Sumit; Szostak, Justyna; Dörpinghaus, Jens; Hoeng, Julia; Fluck, Juliane
Konferenzbeitrag
2017Parallel Algebraic Multigrid
Plum, Hans-Joachim; Krechel, Arnold; Gries, Sebastian; Metsch, Bram; Nick, Fabian; Schweitzer, Marc Alexander; Stüben, Klaus
Aufsatz in Buch
2017Practical undergraduate projects within the BRSU race academy: An example for conducting a new tutored peer-teaching learning approach
Reith, D.; Haedecke, T.; Schulz, E.; Langel, L.; Gemein, L.; Groß, I.
Konferenzbeitrag
2017Preface
Griebel, M.; Schüller, A.; Schweitzer, M.A.
Aufsatz in Buch
2017Preface
Griebel, M.; Schweitzer, M.A.
Konferenzbeitrag
2017Pure functions in C: A small keyword for automatic parallelization
Süß, Tim; Nagel, Lars; Vef, Marc-Andre; Brinkmann, Andre; Feld, Dustin; Soddemann, Thomas
Konferenzbeitrag
2017Rapid Enriched Simulation Application Development with PUMA
Schweitzer, Marc Alexander; Ziegenhagel, Albert
Aufsatz in Buch
2017Real-time gesture recognition using a particle filtering approach
Li, F.; Köping, L.; Schmitz, S.; Grzegorzek, M.
Konferenzbeitrag
2017Recent improvements of the BEL Information Extraction workFlow (BELIEF) for biomedical text mining and curation
Szostak, Justyna; Madan, Sumit; Hayes, William; Doerpinghaus, Jens; Fluck, Juliane; Talikka, Marja; Peitsch, Manuel C.; Hoeng, Julia
Poster
2017Relative electronic and free energies of octane's unique conformations
Kirschner, Karl N.; Heiden, Wolfgang; Reith, Dirk
Zeitschriftenaufsatz
2017Reproducing kernel Hilbert spaces for parametric partial differential equations
Griebel, M.; Rieger, C.
Zeitschriftenaufsatz
2017River Bed Morphodynamics: Metamodeling, Reliability Analysis, and Visualization in a Virtual Environment
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Klimenko, Stanislav
Aufsatz in Buch
2017Scientific Computing and Algorithms in Industrial Simulations
: Griebel, Michael; Schüller, Anton; Schweitzer, Marc Alexander
Buch
2017Search for and detection of pulsars inmonitoring observations at 111 MHz
Tyul’bashev, S.A.; Tyul’bashev, V.S.; Kitaeva, M.A.; Chernyshova, A.I.; Malofeev, V.M.; Chashei, I.V.; Shishov, V.I.; Dagkesamanskii, R.D.; Klimenko, S.V.; Nikitin, I.N.; Nikitina, L.D.
Zeitschriftenaufsatz
2017Semi-Lagrangian off-lattice Boltzmann method for weakly compressible flows
Krämer, Andreas; Küllmer, Knut; Reith, Dirk; Joppich, Wolfgang; Foysi, Holger
Zeitschriftenaufsatz
2017Stable splittings of Hilbert spaces of functions of infinitely many variables
Griebel, M.; Oswald, P.
Zeitschriftenaufsatz
2017StarWatch 3.0: Visualizing wave patterns of phased array radio telescopes
Klimenko, S.; Konich, K.; Nikitin, I.; Nikitina, L.
Konferenzbeitrag
2017Suboptimal Feedback Control of PDEs by Solving HJB Equations on Adaptive Sparse Grids
Garcke, J.; Kröner, A.
Zeitschriftenaufsatz
2017Systemansätze und -komponenten für cross-sektorale Netze
Doetsch, Christian; Clees, Tanja
Aufsatz in Buch
2017Systematic Analysis of GWAS Data Reveals Genomic Hotspots for Shared Mechanisms between Neurodegenerative Diseases
Naz, Mufassra; Younesi, Erfan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Towards a 21st-century roadmap for biomedical research and drug discovery: Consensus report and recommendations
Langley, G.R.; Adcock, I.M.; Busquet, F.; Crofton, K.M.; Csernok, E.; Giese, C.; Heinonen, T.; Herrmann, K.; Hofmann-Apitius, M.; Landesmann, B.; Marshall, L.J.; McIvor, E.; Muotri, A.R.; Noor, F.; Schutte, K.; Seidle, T.; Stolpe, A. van de; Esch, H. van; Willett, C.; Woszczek, G.
Zeitschriftenaufsatz
2017Trial watch: Tracing investment in drug development for Alzheimer disease
Kodamullil, Alpha Tom; Zekri, Firas; Sood, Meemansa; Hengerer, Bastian; Canard, Luc; McHale, Duncan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Upwind schemes for scalar advection-dominated problems in the discrete exterior calculus
Griebel, Michael; Rieger, Christian; Schier, Alexander
Aufsatz in Buch
2017Using drugs as molecular probes: A computational chemical biology approach in neurodegenerative diseases
Emon, Mohammad Asif; Kodamullil, A.T.; Karki, R.; Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2017Visualization of fracture progression in peridynamics
Bußler, M.; Diehl, P.; Pflüger, D.; Frey, S.; Sadlo, F.; Ertl, T.; Schweitzer, M.A.
Zeitschriftenaufsatz
2016Advancements in data management and data mining approaches
Kalaitzopoulos, D.; Patel, K.; Younesi, E.
Aufsatz in Buch
2016Advancing a gateway infrastructure for wind turbine data analysis
Aguilera, Alvaro; Grunzke, Richard; Habich, Dirk; Luong, Johannes; Schollbach, Dirk; Markwardt, Ulf; Garcke, Jochen
Zeitschriftenaufsatz
2016Applications of MpCCI-based fluid/structure interactions coupling to a vibrational and a rotational blades
Yang, Yang; Liou, William W.; Bayrasy, Pascal
Konferenzbeitrag
2016The BEL information extraction workflow (BELIEF): Evaluation in the BioCreative V BEL and IAT track
Madan, Sumit; Hodapp, Sven; Senger, Philipp; Ansari, Sam; Szostak, Justyna; Hoeng, Julia; Peitsch, Manuel; Fluck, Juliane
Zeitschriftenaufsatz
2016BioCreative V track 4: A shared task for the extraction of causal network information using the Biological Expression Language
Rinaldi, Fabio; Ellendorff, Tilia Renate; Madan, Sumit; Clematide, Simon; Lek, Adrian van der; Mevissen, Theo; Fluck, Juliane
Zeitschriftenaufsatz
2016Bond-based peridynamics: A quantitative study of Mode I crack opening
Diehl, Patrick; Franzelin, Fabian; Pflüger, Dirk; Ganzenmüller, Georg C.
Zeitschriftenaufsatz
2016Bringing systems simulations and 3D simulations together using FMI and MpCCI
Kleinert, J.; Wolf, K.; Meyer, C.; Clauß, C.; Hoffmann, K.; Grätz, U.
Konferenzbeitrag
2016Closing the performance gap with modern C++
Heller, Thomas; Kaiser, Hartmut; Diehl, Patrick; Fey, Dietmar; Schweitzer, Marc Alexander
Konferenzbeitrag
2016Cloud standards
Ziegler, Wolfgang; Edmonds, Andy; Metsch, Thijs; Richardson, Alexis; Harsh, Piyush; Kershaw, Philip; Sill, Alan; Carlson, Mark A.; Heneveld, Alex; Atonescu, Alexandru-Florian; Bohnert, Thomas Michael
Aufsatz in Buch
2016A co-simulation approach to model the thermal behavior of automotive vehicles during dynamic driving cycles
Brodbeck, Carsten; Bayrasy, Pascal
Konferenzbeitrag
2016Co-Simulationsmethoden für das thermische Management von Gesamtfahrzeugen bei Betrachtung dynamischer Fahrzyklen
Brodbeck, Carsten; Bayrasy, Pascal
Konferenzbeitrag
2016Comparison of acceleration techniques for selected low-level bioinformatics operations
Langenkämper, D.; Jakobi, T.; Feld, D.; Jelonek, L.; Goesmann, A.; Nattkemper, T.W.
Zeitschriftenaufsatz
2016Computer simulations suggest direct and stable tip to tip interaction between the outer membrane channel TolC and the isolated docking domain of the multidrug RND efflux transporter AcrB
Schmidt, Thomas H.; Raunest, Martin; Fischer, Nadine; Reith, Dirk; Kandt, Christian
Zeitschriftenaufsatz
2016Coupled simulations of electric arcs for switching devices with MpCCI and ANSYS
Bayrasy, Pascal
Konferenzbeitrag
2016Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease
Allen, G.I.; Amoroso, N.; Anghel, C.; Balagurusamy, V.; Bare, C.J.; Beaton, D.; Bellotti, R.; Bennett, D.A.; Boehme, K.L.; Boutros, P.C.; Caberlotto, L.; Caloian, C.; Campbell, F.; Chaibub Neto, E.; Chang, Y.-C.; Chen, B.; Chen, C.-Y.; Chien, T.-Y.; Clark, T.; Das, S.; Davatzikos, C.; Deng, J.; Dillenberger, D.; Dobson, R.J.B.; Dong, Q.; Doshi, J.; Duma, D.; Errico, R.; Erus, G.; Everett, E.; Fardo, D.W.; Friend, S.H.; Fröhlich, H.; Gan, J.; St George-Hyslop, P.; Ghosh, S.S.; Glaab, E.; Green, R.C.; Guan, Y.; Hong, M.-Y.; Huang, C.; Hwang, J.; Ibrahim, J.; Inglese, P.; Iyappan, A.; Jiang, Q.; Katsumata, Y.; Kauwe, J.S.K.; Klein, A.; Kong, D.; Krause, R.; Lalonde, E.; Lauria, M.; Lee, E.; Lin, X.; Liu, Z.; Livingstone, J.; Logsdon, B.A.; Lovestone, S.; Ma, T.-W.; Malhotra, A.; Mangravite, L.M.; Maxwell, T.J.; Merrill, E.; Nagorski, J.; Namasivayam, A.; Narayan, M.; Naz, M.; Newhouse, S.J.; Norman, T.C.; Nurtdinov, R.N.; Oyang, Y.-J.; Pawitan, Y.; Peng, S.; Peters, M.A.; Piccolo, S.R.; Praveen, P.; Pr
Zeitschriftenaufsatz
2016Datenanalysemethoden zur Auswertung von Simulationsergebnissen im Crash und deren Abgleich mit dem Experiment
Garcke, J.; Iza-Teran, R.; Prabakaran, Nikhil
Konferenzbeitrag
2016Decomposing and solving quasilinear second-order differential equations
Schwarz, Fritz
Zeitschriftenaufsatz
2016An efficient geosciences workflow on multi-core processors and GPUs: A case study for aerosol optical depth retrieval from MODIS satellite data
Liu, Jia; Feld, Dustin; Xue, Yong; Garcke, Jochen; Soddemann, Thomas; Pan, Peiyuan
Zeitschriftenaufsatz
2016Einsatz von Highspeed-Projektionsverfahren zur Bewegungs- und Deformationsanalyse von Sicherheitsversuchen
Raguse, Karsten; Lutzke, Peter; Oeckerath, André
Konferenzbeitrag
2016Fluid-structure interaction simulation of racing car spoilers
Landvogt, Bettina
Konferenzbeitrag
2016A full three dimensional numerical simulation of the sediment transport and the scouring at a rectangular obstacle
Burkow, M.; Griebel, M.
Zeitschriftenaufsatz
2016A globally convergent method for generalized resistive systems and its application to stationary problems in gas transport networks
Clees, T.; Hornung, N.; Nikitin, I.; Nikitina, L.
Konferenzbeitrag
2016Hyperbolic cross approximation in infinite dimensions
Dũng, Dinh; Griebel, Michael
Zeitschriftenaufsatz
2016Impact of the scheduling strategy in heterogeneous systems that provide co-scheduling
Süß, Tim; Döring, Nils; Gad, Ramy; Nagel, Lars; Brinkmann, Andre; Feld, Dustin; Schricker, Eric; Soddemann, Thomas
Konferenzbeitrag
2016Integration of UIMA text mining components into an event-based asynchronous microservice architecture
Hodapp, Sven; Madan, Sumit; Fluck, Juliane; Zimmermann, Marc
Konferenzbeitrag
2016Leveraging use of software-license-protected applications in Clouds
Ziegler, Wolfgang; Rasheed, Hassan; Catewicz, Karl
Konferenzbeitrag
2016A multilevel approach to the evolutionary generation of polycrystalline structures
Barker, James; Bollerhey, Gregor; Hamaekers, Jan
Zeitschriftenaufsatz
2016MYNTS: Multi-phYsics NeTwork Simulator
Clees, Tanja; Cassirer, Kläre; Hornung, Nils; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Suter, Robin; Torgovitskaia, Inna
Konferenzbeitrag
2016NeuroRDF: Semantic integration of highly curated data to prioritize biomarker candidates in Alzheimer's disease
Iyappan, A.; Kawalia, S.B.; Raschka, T.; Hofmann-Apitius, M.; Senger, P.
Zeitschriftenaufsatz
2016Numerical aspects of model order reduction for gas transportation networks
Grundel, Sara; Hornung, Nils; Roggendorf, Sarah
Konferenzbeitrag
2016Numerical optimisation of the pseudopotential-based lattice Boltzmann method
Küllmer, K.; Krämer, A.; Reith, D.; Joppich, W.; Foysi, H.
Zeitschriftenaufsatz
2016On tensor product approximation of analytic functions
Griebel, M.; Oettershagen, J.
Zeitschriftenaufsatz
2016Optimized atomistic force fields for aqueous solutions of Magnesium and Calcium Chloride
Elfgen, R.; Hülsmann, M.; Krämer, A.; Köddermann, T.; Kirschner, K.N.; Reith, D.
Zeitschriftenaufsatz
2016Optimizing molecular models through force-field parameterization via the efficient combination of modular program packages
Hülsmann, Marco; Kirschner, Karl N.; Krämer, Andreas; Heinrich, Doron D.; Krämer-Fuhrmann, Ottmar; Reith, Dirk
Konferenzbeitrag
2016Overview of the interactive task in BioCreative V
Wang, Q.; Abdul, S.S.; Almeida, L.; Ananiadou, S.; Balderas-Martínez, Y.I.; Batista-Navarro, R.; Campos, D.; Chilton, L.; Chou, H.-J.; Contreras, G.; Cooper, L.; Dai, H.-J.; Ferrell, B.; Fluck, J.; Gama-Castro, S.; George, N.; Gkoutos, G.; Irin, A.K.; Jensen, L.J.; Jimenez, S.; Jue, T.R.; Keseler, I.; Madan, S.; Matos, S.; McQuilton, P.; Milacic, M.; Mort, M.; Natarajan, J.; Pafilis, E.; Pereira, E.; Rao, S.; Rinaldi, F.; Rothfels, K.; Salgado, D.; Silva, R.M.; Singh, O.; Stefancsik, R.; Su, C.-H.; Subramani, S.; Tadepally, H.D.; Tsaprouni, L.; Vasilevsky, N.; Wang, X.; Chatr-Aryamontri, A.; Laulederkind, S.J.F.; Matis-Mitchell, S.; McEntyre, J.; Orchard, S.; Pundir, S.; Rodriguez-Esteban, R.; Van Auken, K.; Lu, Z.; Schaeffer, M.; Wu, C.H.; Hirschman, L.; Arighi, C.N.
Zeitschriftenaufsatz
2016Parameter studies for energy networks with examples from gas transport
Clees, T.
Konferenzbeitrag
2016Preface
Garcke, J.; Pflüger, D.
Konferenzbeitrag
2016Quasi-Newton methods for unstable partitioned fluid-structure interactions
Koch, Marcel
Konferenzbeitrag
2016Quasi-Newton methods for unstable partitioned fluid-structure interactions
Koch, Marcel
: Garcke, Jochen
Master Thesis
2016RBF-metamodel driven multi-objective optimization and its applications
Clees, Tanja; Hornung, Nils; Nikitin, Igor; Nikitina, Lialia; Steffes-lai, Daniela
Zeitschriftenaufsatz
2016Reasoning over genetic variance information in cause-and-effect models of neurodegenerative diseases
Naz, Mufassra; Kodamullil, Alpha Tom; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2016Rotationally symmetric tilings with convex pentagons and hexagons
Klaassen, Bernhard
Zeitschriftenaufsatz
2016Schwarz iterative methods: Infinite space splittings
Griebel, M.; Oswald, P.
Zeitschriftenaufsatz
2016Shared genetic risk factors of intracranial, abdominal, and thoracic aneurysms
Hof, F.N.G. van't; Ruigrok, Y.M.; Lee, C.H.; Ripke, S.; Anderson, G.; Andrade, M. de; Baas, A.F.; Blankensteijn, J.D.; Böttinger, E.P.; Bown, M.J.; Broderick, J.; Bijlenga, P.; Carrell, D.S.; Crawford, D.C.; Crosslin, D.R.; Ebeling, C.; Eriksson, J.G.; Fornage, M.; Foroud, T.; Fraunberg, M. von und zu; Friedrich, C.M.; Gaál, E.I.; Gottesman, O.; Guo, D.C.; Harrison, S.C.; Hernesniemi, J.; Hofman, A.; Inoue, I.; Jääskeläinen, J.E.; Jones, G.T.; Kiemeney, L.A.L.M.; Kivisaari, R.; Ko, N.; Koskinen, S.; Kubo, M.; Kullo, I.J.; Kuivaniemi, H.; Kurki, M.I.; Laakso, A.; Lai, D.; Leal, S.M.; Lehto, H.; LeMaire, S.A.; Low, S.K.; Malinowski, J.; McCarty, C.A.; Milewicz, D.M.; Mosley, T.H.; Nakamura, Y.; Nakaoka, H.; Niemelä, M.; Pacheco, J.; Peissig, P.L.; Pera, J.; Rasmussen-Torvik, L.; Ritchie, M.D.; Rivadeneira, F.; Rij, A.M. van; Santos-Cortez, R.L.P.; Saratzis, A.; Slowik, A.; Takahashi, A.; Tromp, G.; Uitterlinden, A.G.; Verma, S.S.; Vermeulen, S.H.; Wang, G.T.; Han, B.; Rinkel, G.J.E.; Bakker, P.I.W. de
Zeitschriftenaufsatz
2016Simulation of flow and electro-magnetic induced vibrations
Wirth, Nadja
Konferenzbeitrag
2016A sparse grid based method for generative dimensionality reduction of high-dimensional data
Bohn, Bastian; Garcke, Jochen; Griebel, Michael
Zeitschriftenaufsatz
2016Sparse Grids and Applications - Stuttgart 2014
: Garcke, J.; Pflüger, D.
Tagungsband
2016StarWatch 2.0: RFI filter for SETI signals
Klimenko, S.; Nikitin, I.; Nikitina, L.; Konich, K.; Reinartz, K.; Tyul'Bashev, S.
Konferenzbeitrag
2016Survey of the cloud computing standards landscape 2015
Ziegler, Wolfgang; Becker, Bernd; Darmois, Emmanuel; Kingstedt, Anders; Grand, Olivier le; Schmitting, Peter
Konferenzbeitrag
2016System-AMG approaches for industrial fully and adaptive implicit oil reservoir simulations
Gries, Sebastian
: Trottenberg, U.; Klawonn, A.
Dissertation
2016Towards a pathway inventory of the human brain for modeling disease mechanisms underlying neurodegeneration
Iyappan, A.; Gündel, M.; Shahid, M.; Wang, J.; Li, H.; Mevissen, H.-T.; Müller, B.; Fluck, J.; Jirsa, V.; Domide, L.; Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2016Training and evaluation corpora for the extraction of causal relationships encoded in biological expression language (BEL)
Fluck, Juliane; Madan, Sumit; Ansari, Sam; Kodamullil, Alpha T.; Karki, Reagon; Rastegar-Mojarad, Majid; Catelett, Natalie L.; Hayes, William; Szostak, Justyna; Hoeng, Julia; Peitsch, Manuel C.
Zeitschriftenaufsatz
2016Use of computational fluid dynamics for optimization of cell-based in vitro methods in inhalation research
Brodbeck, C.; Wolf, K.; Ritter, D.; Knebel, J.
Abstract
2016Using co-simulation to reduce the calculation time in vehicle dynamics
Kleinert, Jan; Wolf, Klaus; Christl, Johannes; Kunz, Stefan
Konferenzbeitrag
2016VarySched: A framework for variable scheduling in heterogeneous environments
Süß, Tim; Döring, Nils; Gad, Ramy; Nagel, Lars; Brinkmann, Andre; Feld, Dustin; Soddemann, Thomas; Lankes, Stefan
Konferenzbeitrag
20152-(Hetero(aryl)methylene)hydrazine-1-carbothioamides as potent urease inhibitors
Saeed, A.; Imran, A.; Channar, P.A.; Shahid, M.; Mahmood, W.; Iqbal, J.
Zeitschriftenaufsatz
2015Analysis of flow-induced vibrations in turbomachinery by mapping of complex fluid pressures
Wirth, Nadja; Oeckerath, Andre
Zeitschriftenaufsatz
2015Be an engineer right from the start
Reith, D.; Bachmeier, C.; Groß, I.
Konferenzbeitrag
2015BELIEF dashboard - a web-based curation interface to support generation of BEL networks
Madan, Sumit; Hodapp, Sven; Fluck, Juliane
Konferenzbeitrag
2015BioCreative V a new challenge in text mining for biocuration
Arighi, Cecilia N.; Chatraryamontri, Andrew; Kevin, Cohen B.; Comeau, Donald; Fluck, Juliane; Dogan, Rezarta Islamaj; Hirschman, Lynette; Kim, Sun; Krallinger, Martin; Leitner, Florian; Lu, Zhiyong; Oyarzabal, Julen; Rabal, Obdulia; Rinaldi, Fabio; Tudor, Catalina O.; Valencia, Alfonso; Wiegers, Thomas; Wilbur, John; Wu, Cathy H.
Abstract
2015Bioinformatics mining and modeling methods for the identification of disease mechanisms in neurodegenerative disorders
Hofmann-Apitius, Martin; Ball, Gordon; Gebel, Stephan; Bagewadi, Shweta; Bono, Bernard de; Schneider, Reinhard; Page, Matt; Kodamullil, Alpha Tom; Younesi, Erfan; Ebeling, Christian; Tegnér, Jesper; Canard, Luc
Zeitschriftenaufsatz
2015Boosting translational research on Alzheimer's disease in Europe: The Innovative Medicine Initiative AD research platform
Vaudano, E.; Vannieuwenhuyse, B.; Geyten, S. van der; Lei, J. van der; Visser, P.J.; Streffer, J.; Ritchie, C.; McHale, D.; Lovestone, S.; Hofmann-Apitius, M.; Truyen, L.; Goldman, M.
Zeitschriftenaufsatz
2015Carl Adam Petri. Life and Science
Smith, Einar
Buch
2015Co-simulations of discrete and finite element codes
Dehning, C.; Bierwisch, C.; Kraft, T.
Konferenzbeitrag
2015Computable cause-and-effect models of healthy and Alzheimer's disease states and their mechanistic differential analysis
Kodamullil, A.T.; Younesi, E.; Naz, M.; Bagewadi, S.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2015Computational modelling approaches on epigenetic factors in neurodegenerative and autoimmune diseases and their mechanistic analysis
Irin, Afroza Khanam; Kodamullil, Alpha Tom; Gündel, Michaela; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2015Computing highest-order divisors for a class of quasi-linear partial differential equations
Grigoriev, Dima; Schwarz, Fritz
Konferenzbeitrag
2015Construction of biological networks from unstructured information based on a semi-automated curation workflow
Szostak, Justyna; Ansari, Sam; Madan, Sumit; Fluck, Juliane; Talikka, Marja; Iskandar, Anita; Leon, Hector de; Hofmann-Apitius, Martin; Peitsch, Manuel C.; Hoeng, Julia
Zeitschriftenaufsatz
2015Data management and processing in toxicoinformatics - from chemical databases to automatic extraction of unstructured resources
Fluck, Juliane; Zimmermann, Marc
Aufsatz in Buch
2015Detecting miRNA mentions and relations in biomedical literature
Bagewadi, S.; Bobic, T.; Hofmann-Apitius, M.; Fluck, J.; Klinger, R.
Zeitschriftenaufsatz
2015Development and validation of a CAE chain for unidirectional fibre reinforced composite components
Kärger, L.; Bernath, A.; Fritz, F.; Galkin, S.; Magagnato, D.; Oeckerath, A.; Schön, A.; Henning, F.
Zeitschriftenaufsatz
2015Dispersion Properties of the Partition of Unity Method and Explicit Dynamics
Schweitzer, M.A.; Ziegenhagel, A.
Konferenzbeitrag
2015Efficient Neighbor Search for Particle Methods on GPUs
Diehl, P.; Schweitzer, M.A.
Konferenzbeitrag
2015Exploring novel mechanistic insights in Alzheimer's disease by assessing reliability of protein interactions
Malhotra, A.; Younesi, E.; Sahadevan, S.; Zimmermann, J.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2015A finite element study on the effect of curvature on the reinforcement of matrices by randomly distributed and curved nanotubes
Diedrich, C.; Dijkstra, D.; Hamaekers, J.; Henninger, B.; Randrianarivony, M.
Zeitschriftenaufsatz
2015Fraunhofer-Institut für Algorithmen und Wissenschaftliches Rechnen. Jahresbericht 2013/2014
 
Jahresbericht
2015Hardware-aware automatic code-transformation to support compilers in exploiting the multi-level parallel potential of modern CPUs
Feld, D.; Soddemann, T.; Jünger, Michael; Mallach, Sven
Zeitschriftenaufsatz, Konferenzbeitrag
2015Identification of gene co-expression clusters in liver tissues from multiple porcine populations with high and low backfat androstenone phenotype
Sahadevan, S.; Tholen, E.; Grosse-Brinkhaus, C.; Schellander, K.; Tesfaye, D.; Hofmann-Apitius, M.; Cinar, M.U.; Gunawan, A.; Hölker, M.; Neuhoff, C.
Zeitschriftenaufsatz
2015Improvements of an air-liquid interface in-vitro testing method for inhalable compounds using CFD-methods
Brodbeck, C.; Ritter, D.; Knebel, J.
Konferenzbeitrag
2015Increasing data center energy efficiency via simulation and optimization of cooling circuits - a practical approach
Wilde, Torsten; Clees, Tanja; Shoukourian, Hayk; Hornung, Nils; Schnell, Michael; Torgovitskaia, Inna; Lluch Alvarez, Eric; Labrenz, Detlef; Schwichtenberg, Horst
Konferenzbeitrag
2015An integrated systems-based model for substantiation of health claims in functional food development
Younesi, E.; Ayseli, M.T.
Zeitschriftenaufsatz
2015Interpretation of large scale biological data facilitated by curated causal biological network models
Szostak, Justyna; Ansari, Sam; Boue, Stephanie; Talikka, Marja; Fluck, Juliane; Peitsch, Manuel; Hoeng, Julia
Abstract
2015Is dementia research ready for big data approaches?
Hofmann-Apitius, M.
Zeitschriftenaufsatz
2015Knowledge retrieval from PubMed abstracts and electronic medical records with the multiple sclerosis ontology
Malhotra, A.; Gündel, M.; Rajput, A.M.; Mevissen, H.T.; Saiz, A.; Pastor, X.; Lozano-Rubi, R.; Martinez-Lapsicina, E.H.; Zubizarreta, I.; Mueller, B.; Kotelnikova, E.; Toldo, L.; Hofmann-Apitius, M.; Villoslada, P.
Zeitschriftenaufsatz
2015Machine learning approaches for repositories of numerical simulation results
Garcke, J.; Iza Teran, R.
Konferenzbeitrag
2015Meshfree Methods for Partial Differential Equations VII
: Griebel, M.; Schweitzer, M.A.
Tagungsband
2015Multicore processors and graphics processing unit accelerators for parallel retrieval of aerosol optical depth from satellite data
Liu, Jia; Feld, Dustin; Xue, Yong; Garcke, Jochen; Soddemann, Thomas
Zeitschriftenaufsatz
2015Multilevel Partition of Unity Method for Elliptic Problems with Strongly Discontinuous Coefficients
Schweitzer, M.A.
Konferenzbeitrag
2015Multiscale approximation and reproducing kernel Hilbert space methods
Griebel, M.; Rieger, C.; Zwicknagl, B.
Zeitschriftenaufsatz
2015NeuroTransDB: Highly curated and structured transcriptomic metadata for neurodegenerative diseases
Bagewadi, Shweta; Adhikari, Subash; Dhrangadhariya, Anjani; Irin, Afroza Khanam; Ebeling, Christian; Namasivayam, Aishwarya Alex; Page, Matthew; Hofmann-Apitius, Martin; Senger, Philipp
Zeitschriftenaufsatz
2015Numerical Integration of on-the-fly-computed Enrichment Functions in the PUM
Schweitzer, M.A.; Wu, S.
Konferenzbeitrag
2015Optimal scaling parameters for sparse grid discretizations
Griebel, M.; Hullmann, A.; Oswald, P.
Zeitschriftenaufsatz
2015Overview of the interactive task in BioCreative V
Wang, Qinghua; Abdul, Shabbir Syed; Almeida, Lara; Ananiadou, Sophia; Balderas-Martínez, Yalbi Itzel; BatistaNavarro, Riza; Campos, David; Chilton, Lucy; Chou, Hui-Jou; Contreras, Gabriela; Cooper, Laurel; Dai, Hong-Jie; Fluck, Juliane; Gama, Socorro; Gkoutos, Georgios; Irin, Afroza Khanam; Jensen, Lars Juhl; Jimenez, Silvia; Jue, Toni Rose; Keseler, Ingrid; Madan, Sumit; Matos, Sérgio; McQuilton, Peter; Mort, Matthew; Natarajan, Jeyakumar; Pafilis, Evangelos; Pereira, Emiliano; Rao, Shruti; Rinaldi, Fabio; Salgado, David; Singh, Onkar; Stefancsik, Raymund; Su, Chu-Hsien; Subramani, Suresh; Tadepally, Hamsa Dhwani; Tsaprouni, Loukia; Vasilevsky, Nicole; Wang, Xiaodong; Chatr-aryamontri, Andrew; Laulederkind, Stan; Matis-Mitchell, Sherri; McEntyre, Johanna; Orchard, Sandra; Pundir, Sangya; Rodriguez-Esteban, Raul; Auken, Kimberly Van; Lu, Zhiyong; Schaeffer, Mary; Hirschman, Lynette; Arighi, Cecilia
Konferenzbeitrag
2015Parametric model order reduction with a small H2-error using radial basis functions
Benner, Peter; Grundel, Sara; Hornung, Nils
Zeitschriftenaufsatz
2015PDON: Parkinson's disease ontology for representation and modeling of the Parkinson's disease knowledge domain
Younesi, E.; Malhotra, A.; Gündel, M.; Scordis, P.; Kodamullil, A.T.; Page, M.; Müller, B.; Springstubbe, S.; Wüllner, U.; Scheller, D.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2015Petri and how he saw the world
Smith, E.
Zeitschriftenaufsatz
2015Quantifying the biological impact of active substances using causal network models
Sewer, A.; Martin, F.; Schlage, W.K.; Hoeng, J.; Peitsch, M.C.
Aufsatz in Buch
2015Quasi-Monte Carlo and RBF metamodeling for quantile estimation in river bed morphodynamics
Clees, T.; Nikitin, I.; Nikitina, L.; Pott, S.
Konferenzbeitrag
2015Radio Astronomical Monitoring in Virtual Environment
Klimenko, Stanislav; Konich, Kira; Nikitin, Igor; Malofeev, Valery; Tyul'bashev, Sergey
Zeitschriftenaufsatz
2015RBF-metamodel Driven Multiobjective Optimization and its Application in Focused Ultrasonic Therapy Planning
Clees, Tanja; Hornung, Nils; Nikitin, Igor; Nikitina, Lialia; Steffes-Lai, Daniela
Konferenzbeitrag
2015Simulation of the oil storage process in the scopa of specialized bees
Rüttgers, A.; Griebel, M.; Pastrik, L.; Schmied, H.; Wittmann, D.; Scherrieble, A.; Dinkelmann, A.; Stegmaier, T.
Zeitschriftenaufsatz
2015Simulation of wave propagation and impact damage in brittle materials using peridynamics
Diehl, P.; Schweitzer, M.A.
Konferenzbeitrag
2015StarWatch: Radio Astronomical Monitoring in Virtual Environment
Klimenko, Stanislav; Nikitin, Igor; Malofeev, Valerie
Konferenzbeitrag
2015Status of system-AMG for reservoir simulation applications
Gries, Sebastian; Plum, Hans-Joachim
Konferenzbeitrag
2015Synthesis, characterization, hypoglycemic and aldose reductase inhibition activity of arylsulfonylspiro[fluorene-9,5-imidazolidine]-2′,4′-diones
Iqbal, Z.; Hameed, S.; Ali, S.; Tehseen, Y.; Shahid, M.; Iqbal, J.
Zeitschriftenaufsatz
2015Systems approach for the selection of micro-RNAs as therapeutic biomarkers of anti-EGFR monoclonal antibody treatment in colorectal cancer
Deyati, Avisek; Bagewadi, Shweta; Senger, Philipp; Hofmann-Apitius, Martin; Novac, Natalia
Zeitschriftenaufsatz
2015Towards a three-dimensional numerical simulation of fluvial geomorphological processes and the reconstruction of past events
Burkow, M.; Griebel, M.
Zeitschriftenaufsatz
2015Towards an industry data gateway: An integrated platform for the analysis of wind turbine data
Aguilera, A.; Grunzke, R.; Markwardt, U.; Schollbach, D.; Habich, D.; Garcke, J.
Konferenzbeitrag
2015Towards the taxonomy of human disease. Editorial
Hofmann-Apitius, Martin; Alarcon-Riquelme, M.E.; Chamberlain, C.; McHale, D.
Zeitschriftenaufsatz
2015Track 4 overview: Extraction of causal network information in biological expression language (BEL)
Fluck, Juliane; Madan, Sumit; Ellendorf, Tilia; Mevissen, Heinz-Theodor; Clematide, Simon; Lek, Adrian van der; Rinaldi, Fabio
Konferenzbeitrag
2015VERCE delivers a productive e-science environment for seismology research
Atkinson, M.; Carpene, M.; Casarotti, E.; Claus, S.; Filgueira, R.; Frank, A.; Galea, M.; Garth, T.; Gemünd, A.; Igel, H.; Klampanos, I.; Krause, A.; Krischer, L.; Leong, Siew Hoon; Magnoni, F.; Matser, J.; Michelini, A.; Rietbrock, A.; Schwichtenberg, H.; Spinuso, A.; Vilotte, J.-P.
Konferenzbeitrag
2015Visualizing potential energy curves and conformations on ultra high-resolution display walls
Kirschner, Karl N.; Reith, Dirk; Jato, Oliver; Hinkenjann, André
Zeitschriftenaufsatz
2015Where am I? A Fast Multidimensional Point Location Test and its Applications
Clees, Tanja; Huttemann, Martin; Nikitin, Igor; Nikitina,Lialia; Steffes-Lai, Daniela
Konferenzbeitrag
20143D computational simulation of calcium leaching in cement matrices
Gaitero, J.J.; Dolado, J.S.; Neuen, C.; Heber, F.; Koenders, E.A.B.
Zeitschriftenaufsatz
20143D incompressible two-phase flow benchmark computations for rising droplets
Adelsberger, J.; Esser, P.; Griebel, M.; Groß, S.; Klitz, M.; Rüttgers, A.
Konferenzbeitrag
2014Adaptive Sparse Grids in Reinforcement Learning
Garcke, Jochen; Klompmaker, Irene
Aufsatz in Buch
2014ADO: A disease ontology representing the domain knowledge specific to Alzheimer's disease
Malhotra, A.; Younesi, E.; Gündel, M.; Müller, B.; Heneka, M.T.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2014Annotated chemical patent corpus: A gold standard for text mining
Akhondi, S.A.; Klenner, A.G.; Tyrchan, C.; Manchala, A.K.; Boppana, K.; Lowe, D.; Zimmermann, M.; Jagarlapudi, S.A.R.P.; Sayle, R.; Kors, J.A.; Muresan, S.
Zeitschriftenaufsatz
2014Approximation methods for high dimensional simulation results - parameter sensitivity analysis and propagation of variations for process chains
Steffes-lai, Daniela
Dissertation
2014Approximation of bi-variate functions: Singular value decomposition versus sparse grids
Griebel, Michael; Harbrecht, Helmut
Zeitschriftenaufsatz
2014Automated parameterization of intermolecular pair potentials using global optimization techniques
Krämer, Andreas; Hülsmann, Marco; Köddermann, Thorsten; Reith, Dirk
Zeitschriftenaufsatz
2014Automatic parameter classification for dimension reduction as basis for robust parameter identification
Steffes-Lai, D.
Konferenzbeitrag
2014BELIEF - a semiautomatic workflow for BEL network creation
Fluck, Juliane; Madan, Sumit; Ansari, Sam; Szostak, Justyna; Hoeng, Julia; Zimmermann, Marc; Hofmann-Apitius, Martin; Peitsch, Manuel C
Konferenzbeitrag
2014A bond order dissection ANOVA approach for efficient electronic structure calculations
Griebel, M.; Hamaekers, J.; Heber, F.
Aufsatz in Buch
2014Carl Adam Petri. Eine Biographie
Smith, Einar
Buch
2014CSEO - The Cigarette Smoke Exposure Ontology
Younesi, E.; Ansari, S.; Guendel, M.; Ahmadi, S.; Coggins, C.; Hoeng, J.; Hofmann-Apitius, M.; Peitsch, M.C.
Zeitschriftenaufsatz
2014Data Analytics for Simulation Repositories in Industry
Iza-Teran, R.; Garcke, J.
Konferenzbeitrag
2014Design, synthesis, molecular docking studies and in vitro screening of ethyl 4-(3-benzoylthioureido) benzoates as urease inhibitors
Saeed, A.; Khan, M.S.; Rafique, H.; Shahid, M.; Iqbal, J.
Zeitschriftenaufsatz
2014Dimension-adaptive sparse grid quadrature for integrals with boundary singularities
Griebel, Michael; Oettershagen, Jens
Konferenzbeitrag
2014Dimensionality reduction of high-dimensional data with a nonLinear principal component aligned generative topographic mapping
Griebel, M.; Hullmann, A.
Zeitschriftenaufsatz
2014Eine effiziente Methodik für die robuste Optimierung bei der Bauteildimensionierung
Rhein, Beate; Ruschitzka, Margot; Clees, Tanja
Zeitschriftenaufsatz
2014Enabling the analysis of finite element simulation bundles
Teran, R.I.
Zeitschriftenaufsatz
2014Entwicklung einer numerischen Methode zur Berücksichtigung stochastischer Effekte für die Crashsimulation von Punktschweißverbindungen
Sommer, S.; Stefes-lai, D.; Clees, T.
Bericht
2014EXAHD: An exa-scalable two-level sparse grid approach for higher-dimensional problems in plasma physics and beyond
Pflüger, Dirk; Bungartz, Hans-Joachim; Griebel, Michael; Jenko, Frank; Dannert, Tilman; Heene, Mario; Kowitz, Christoph; Hinojosa, Alfredo Parra; Zaspel, Peter
Konferenzbeitrag
2014Expressing quality of service and protection using federation-level service level agreement
Blasi, Lorenzo; Jensen, Jens; Ziegler, Wolfgang
Konferenzbeitrag
2014Fast discrete fourier transform on generalized sparse grids
Griebel, M.; Hamaekers, J.
Konferenzbeitrag
2014Focused ultrasonic therapy planning: Metamodeling, optimization, visualization
Clees, T.; Hornung, N.; Nikitin, I.; Nikitina, L.; Steffes-lai, D.; Klimenko, S.
Zeitschriftenaufsatz
2014Implementing a "one-stop-shop" providing SMEs with integrated HPC simulation resources using Fortissimo resources
Ziegler, Wolfgang; D'Ippolito, Roberto; D'Auria, Massimo; Berends, Jochem; Nelissen, Maarten; Diaz, Ramon
Konferenzbeitrag
2014Importance Weighted Inductive Transfer Learning for Regression
Garcke, Jochen; Vanck, Thomas
Konferenzbeitrag
2014A linear solver based on algebraic multigrid and defect correction for the solution of adjoint RANS equations
Förster, M.; Pal, A.
Zeitschriftenaufsatz
2014A linear sparse systems solver (LSSS) applied to the Classification of integrable non-abelian laurent ODEs
Wolf, T.; Schrüfer, E.; Webster, K.
Zeitschriftenaufsatz
2014Linking hypothetical knowledge patterns to disease molecular signatures for biomarker discovery in Alzheimer's disease
Malhotra, Ashutosh; Younesi, Erfan; Bagewadi, Shweta; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2014Maschinelle Lernverfahren zur effizienten und interaktiven Auswertung großer Mengen von CAE-Modellvarianten
Garcke, J.; Iza-Teran, R.
Konferenzbeitrag
2014Model order reduction of differential algebraic equations arising from the simulation of gas transport networks
Grundel, Sara; Jansen, Lennart; Hornung, Nils; Clees, Tanja; Tischendorf, Caren; Benner, Peter
Konferenzbeitrag
2014Molecular biomarkers in clinical development: What could we learn from the clinical trial registry?
Deyati, A.; Sanam, R.D.; Guggilla, S.R.; Pidugu, V.R.; Novac, N.
Zeitschriftenaufsatz
2014A Moving Least Squares Approach to the Construction of Discontinuous Enrichment Functions
Schweitzer, M.A.; Wu, S.
Aufsatz in Buch
2014Multiscale simulations of three-dimensional viscoelastic flows in a square-square contraction
Griebel, M.; Rüttgers, A.
Zeitschriftenaufsatz
2014NeuroRDF: Semantic data integration strategies for modeling neurodegenerative diseases
Iyappan, Anandhi; Bagewadi, Shweta; Page, Matthew; Hofmann-Apitius, Martin; Senger, Philipp
Konferenzbeitrag
2014New aminobenzenesulfonamide-thiourea conjugates: Synthesis and carbonic anhydrase inhibition and docking studies
Zaib, S.; Saeed, A.; Stolte, K.; Flörke, U.; Shahid, M.; Iqbal, J.
Zeitschriftenaufsatz
2014A new optimization phase for scientific workflow management systems
Holl, S.; Zimmermann, O.; Palmblad, M.; Mohammed, Y.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2014Numerical simulation of fluid-structure interaction in the design process for a new axial hydraulic pump
Landvogt, B.; Osiecki, L.; Patrosz, P.; Zawistowski, T.; Zylinski, B.
Zeitschriftenaufsatz
2014On a multilevel preconditioner and its condition numbers for the discretized Laplacian on full and sparse grids in higher dimensions
Griebel, M.; Hullmann, A.
Aufsatz in Buch
2014On the convergence of the combination technique
Griebel, M.; Harbrecht, H.
Konferenzbeitrag
2014A one-time stegosystem and applications to efficient covert communication
Kiayias, A.; Raekow, Y.; Russell, A.; Shashidhar, N.
Zeitschriftenaufsatz
2014Pathway based analysis of genes and interactions influencing porcine testis samples from boars with divergent androstenone content in back fat
Sahadevan, S.; Gunawan, A.; Tholen, E.; Große-Brinkhaus, C.; Tesfaye, D.; Schellander, K.; Hofmann-Apitius, M.; Cinar, M.U.; Uddin, M.J.
Zeitschriftenaufsatz
2014Petri und wie er die Welt sah
Smith, E.
Zeitschriftenaufsatz
2014Preconditioning for efficiently applying algebraic multigrid in fully implicit reservoir simulations
Gries, S.; Stüben, K.; Brown, G.L.; Chen, D.; Collins, D.A.
Zeitschriftenaufsatz
2014Rational design and development of novel multi-target inhibitors for influenza virus
Ishitsubo, E.; Hosozawa, T.; Igarashi, M.; Kirshner, K.N.; Sriwilaijaroen, N.; Yokoe, H.; Tubuki, M.; Suzuki, Y.; Tokiwa, H.
Konferenzbeitrag, Zeitschriftenaufsatz
2014Robust optimization for long running computer simulations with a focus on robustness measures
Rhein, B.; Clees, T.; Ruschitzka, M.
Konferenzbeitrag
2014Robuste Optimierung mit Quantilmaßen auf globalen Metamodellen
Rhein, Beate
Dissertation
2014Robustness measures and numerical approximation of the cumulative density function of response surfaces
Rhein, B.; Clees, T.; Ruschitzka, M.
Zeitschriftenaufsatz
2014SIMDATA-NL - Nichtlineare Charakterisierung und Analyse von FEM-Simulationsergebnissen für Autobauteile und Crash-Tests
Griebel, Michael; Bungartz, Hans-Joachim; Czado, Claudia; Garcke, Jochen; Trottenberg, Ulrich; Thole, Clemens-August; Bohn, Bastian; Iza-Teran, Rodrigo; Paprotny, Alexander; Peherstorfer, Benjamin; Schepsmeier, Ulf
Bericht
2014Simulation of dilute polymeric fluids in a three-dimensional contraction using a multiscale FENE model
Griebel, M.; Rüttgers, A.
Konferenzbeitrag
2014Simulation of droplet impact with dynamic contact angle boundary conditions
Griebel, M.; Klitz, M.
Aufsatz in Buch
2014Singular Phenomena and Scaling in Mathematical Models
: Griebel, M.
Buch
2014A sparse grid based generative topographic mapping for the dimensionality reduction of high-dimensional data
Griebel, M.; Hullmann, A.
Konferenzbeitrag
2014Sparse Grids and Applications
: Garcke, Jochen; Pflüger, Dirk
Tagungsband
2014Structure-activity relationships of thiostrepton derivatives: implications for rational drug design
Wolf, Antje; Schoof, Sebastian; Baumann, Sascha; Arndt, Hans-Dieter; Kirschner, Karl N.
Zeitschriftenaufsatz
2014Successive global and local optimization techniques utilized to generate new accurate VLE force fields
Kramer, A.; Hülsmann, M.; Reith, D.
Konferenzbeitrag
2014Synthesis, cytotoxicity and molecular modelling studies of new phenylcinnamide derivatives as potent inhibitors of cholinesterases
Saeed, A.; Mahesar, P.A.; Zaib, S.; Khan, M.S.; Matin, A.; Shahid, M.; Iqbal, J.
Zeitschriftenaufsatz
2014Text mining for systems biology
Fluck, Juliane; Hofman-Apitius, Martin
Zeitschriftenaufsatz
2013'HypothesisFinder:' A strategy for the detection of speculative statements in scientific text
Malhotra, A.; Younesi, E.; Gurulingappa, H.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2013An adaptive sparse grid approach for time series prediction
Bohn, B.; Griebel, M.
Aufsatz in Buch
2013An adaptive sparse grid semi-Lagrangian scheme for first order Hamilton-Jacobi Bellman equations
Bokanowski, O.; Garcke, J.; Griebel, M.; Klompmaker, I.
Zeitschriftenaufsatz
2013AMG in TAU: Adjoint equations and mesh deformation
Förster, M.; Pal, A.
Konferenzbeitrag
2013Analysis of bulky crash simulation results: Deterministic and stochastic aspects
Clees, T.; Nikitin, I.; Nikitina, L.; Thole, C.-A.
Konferenzbeitrag
2013Analysis of car crash simulation data with nonlinear machine learning methods
Bohn, B.; Garcke, J.; Iza-Teran, R.; Paprotny, A.; Peherstorfer, B.; Schepsmeier, U.; Thole, C.-A.
Konferenzbeitrag, Zeitschriftenaufsatz
2013BEL networks derived from qualitative translations of BioNLP shared task annotations
Fluck, Juliane; Klenner, Alexander; Madan, Sumit; Ansari, Sam; Bobic, Tamara; Hoeng, Julia; Hofman-Apitius, Martin; Peitsch, Manuel
Konferenzbeitrag
2013Berücksichtigung prozessbedingter Streuung von Punktschweißverbindungen
Sommer, Silke; Steffes-lai, Daniela; Clees, Tanja
Zeitschriftenaufsatz
2013Biomarker-guided translation of brain imaging into disease pathway models
Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2013A business logic system for mining German patient records
Senger, Philipp; Klenner, Alexander; Fluck, Juliane
Abstract
2013Challenges and opportunities for oncology biomarker discovery
Younesi, Erfan; Hofmann-Apitius, Martin; Dyati, Avisek; Novac, Natalia
Zeitschriftenaufsatz
2013Computing divisors and common multiples of quasi-linear ordinary differential equations
Grigoriev, D.; Schwarz, F.
Konferenzbeitrag
2013Computing surrogates for gas network simulation using model order reduction
Grundel, Sara; Hornung, Nils; Klaassen, Bernhard; Benner, Peter; Clees, Tanja
Aufsatz in Buch
2013Efficient gradient and Hessian calculations for numerical optimization algorithms applied to atomistic molecular simulations
Hülsmann, Marco; Kopp, Sonja; Huber, Markus; Reith, Dirk
Zeitschriftenaufsatz, Konferenzbeitrag
2013An efficient knowledge based system for the prediction of the technical feasibility of sheet metal forming processes
Steffes-lai, Daniela; Turck, Sven; Klimmek, Christian; Clees, Tanja
Konferenzbeitrag
2013Efficient quantile estimators for river bed morphodynamics
Clees, T.; Nikitin, I.; Nikitina, L.; Pott, S.
Konferenzbeitrag
2013An efficient sparse grid Galerkin approach for the numerical valuation of basket options under Kou's jump-diffusion model
Griebel, M.; Hullmann, A.
Aufsatz in Buch
2013ESPResSo++: A modern multiscale simulation package for soft matter systems
Halverson, Jonathan D.; Brandes, Thomas; Lenz, Olaf; Arnold, Axel; Bevc, Stas; Starchenko, Vitaliy; Kremer, Kurt; Stuehn, Torsten; Reith, Dirk
Zeitschriftenaufsatz
2013Experience made using public cloud infrastructure to analyse clinical patient data
Ziegler, Wolfgang; Ihle, Matthias; Claus, Steffen; Senger, Philipp; Mohebbi, Pooya; Khan, Zakir; Fluck, Juliane; Griebel, Lena; Sedlmayr, Martin; Berger, Florian; Laufer, Julian; Chatziastros, Astros; Drepper, Johannes
Konferenzbeitrag
2013Facilitate SIMD-code-generation in the polyhedral model by hardware-aware automatic code-transformation
Feld, Dustin; Soddemann, Thomas; Jünger, Michael; Mallach, Sven
Konferenzbeitrag
2013Fast approximation of the discrete Gauss transform in higher dimensions
Griebel, M.; Wissel, D.
Zeitschriftenaufsatz
2013A Framework for Simulation Process Management and Data Mining
Schöne, C.; Iza-Teran, R.; Garcke, J.
Konferenzbeitrag
2013From integrative disease modeling to predictive, preventive, personalized and participatory (P4) medicine
Younesi, Erfan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2013GASPI - a partitioned global address space programming interface
Alrutz, T.; Backhaus, J.; Brandes, T.; End, V.; Gerhold, T.; Geiger, A.; Grünewald, D.; Heuveline, V.; Jägersküpper, J.; Knüpfer, A.; Krzikalla, O.; Kügeler, E.; Lojewski, C.; Lonsdale, G.; Müller-Pfefferkorn, R.; Nagel, W.; Oden, L.; Pfreundt, F.-J.; Rahn, M.; Sattler, M.; Schmidtobreick, M.; Schiller, A.; Simmendinger, C.; Soddemann, T.; Sutmann, G.; Weber, H.; Weiss, J.-P.
Konferenzbeitrag
2013HuPSON: The human physiology simulation ontology
Gündel, Michaela; Younesi, Erfan; Malhotra, Ashutosh; Wang, Jiali; Li, Hui; Zhang, Bijun; Bono, Bernard de; Mevissen, Heinz-Theodor; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2013Identification of the novel candidate genes and variants in boar liver tissues with divergent skatole levels using RNA deep sequencing
Gunawan, A.; Sahadevan, S.; Cinar, M.U.; Neuhoff, C.; Große-Brinkhaus, C.; Frieden, L.; Tesfaye, D.; Tholen, E.; Looft, C.; Wondim, D.S.; Hölker, M.; Schellander, K.; Uddin, M.J.
Zeitschriftenaufsatz
2013Intraday foreign exchange rate forecasting using sparse grids
Garcke, J.; Gerstner, T.; Griebel, M.
Aufsatz in Buch
2013Ligand-specific binding and activation of the human adenosine A(2B) receptor
Thimm, D.; Schiedel, A.C.; Sherbiny, F.F.; Hinz, S.; Hochheiser, K.; Bertarelli, D.C.G.; Maass, A.; Müller, C.E.
Zeitschriftenaufsatz
2013Loewy decomposition of linear differential equations
Schwarz, Fritz
Zeitschriftenaufsatz
2013Meshfree Methods for Partial Differential Equations VI
: Griebel, M.; Schweitzer, M.A.
Tagungsband
2013Modern information technology: Information visualization, virtual environment, neo-geography, tangible images
Aleshin, A.; Afanasiev, V.; Brusentsev, P.; Eremchenko, E.; Klimenko, A.; Klimenko, S.; Nikitin, I.; Nikitina, L.; Pestrikov, V.; Sourin, A.; Sourina, O.
Zeitschriftenaufsatz
2013Multi-objective optimization and stochastic analysis in focused ultrasonic therapy simulation
Clees, T.; Hornung, N.; Nikitin, I.; Nikitina, L.; Steffes-lai, D.
Konferenzbeitrag
2013Multiscale simulation of ion migration for battery systems
Neuen, Christian; Griebel, Michael; Hamaekers, Jan
Konferenzbeitrag
2013A network model of genomic hormone interactions underlying dementia and its translational validation through serendipitous off-target effect
Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2013A note on the construction of L-fold sparse tensor product spaces
Griebel, M.; Harbrecht, H.
Zeitschriftenaufsatz
2013On space enrichment estimator for nonlinear Poisson-Boltzmann
Randrianarivony, M.
Konferenzbeitrag
2013On the construction of sparse tensor product spaces
Griebel, M.; Harbrecht, H.
Zeitschriftenaufsatz
2013On the nature of interactions between ionic liquids and small amino-acid-based biomolecules
Tietze, A.A.; Bordusa, F.; Giernoth, R.; Imhof, D.; Lenzer, T.; Maaß, A.; Mrestani-Klaus, C.; Neundorf, I.; Oum, K.; Reith, D.; Stark, A.
Zeitschriftenaufsatz
2013On-demand software licence provisioning in grid and cloud computing
Raekow, Y.; Simmendinger, C.; Jenz, D.; Grabowski, P.
Zeitschriftenaufsatz
2013Preconditioning for efficiently applying algebraic multigrid in fully implicit reservoir simulations
Gries, S.; Stüben, K.; Brown, G.L.; Chen, D.; Collins, D.A.
Konferenzbeitrag
2013Principal component and clustering analysis on molecular dynamics data of the ribosomal L11 center dot 23S subdomain
Wolf, A.; Kirschner, K.N.
Zeitschriftenaufsatz
2013Risk of rupture of small anterior communicating artery aneurysms is similar to posterior circulation aneurysms
Bijlenga, P.; Ebeling, C.; Jaegersberg, M.; Summers, P.; Rogers, A.; Waterworth, A.; Iavindrasana, J.; Macho, J.; Pereira, V.M.; Bukovics, P.; Vivas, E.; Sturkenboom, M.C.J.M.; Wright, J.; Friedrich, C.M.; Frangi, A.; Byrne, J.; Schaller, K.; Rufenacht, D.
Zeitschriftenaufsatz
2013SCAI: Extracting drug-drug interactions using a rich feature vector
Bobic, Tamara; Fluck, Juliane; Hofmann-Apitius, Martin
Konferenzbeitrag
2013SIMOPEK - Simulation and Optimization of Data Center Energy Flows from Cooling Networks taking into Account HPC Operation Scenarios
Clees, Tanja; Wilde, Torsten
Zeitschriftenaufsatz
2013A Simulation Framework for Robust Optimization Based on Metamodels
Rhein, Beate; Ruschitzka, Margot; Clees, Tanja
Konferenzbeitrag
2013Simulation of fluid structure interaction in a novel design of high pressure axial piston hydraulic pump
Osiecki, L.; Patrosz, P.; Landvogt, B.; Piechna, J.; Zawistowski, T.; Zylinski, B.
Zeitschriftenaufsatz
2013The smoothing effect of integration in $\mathbb{R}d$ and the ANOVA decomposition
Griebel, M.; Kuo, F.Y.; Sloan, I.H.
Zeitschriftenaufsatz
2013Solution-phase microwave assisted parallel synthesis of N,N-disubstituted thioureas derived from benzoic acid: Biological evaluation and molecular docking studies
Rauf, M.K.; Talib, A.; Badshah, A.; Zaib, S.; Shoaib, K.; Shahid, M.; Flörke, U.; Imtiaz-ud-Din; Iqbal, J.
Zeitschriftenaufsatz
2013Solving incompressible two-phase flows on multi-GPU clusters
Zaspel, P.; Griebel, M.
Zeitschriftenaufsatz, Konferenzbeitrag
2013SpaGrOWA - a derivative-free optimization scheme for intermolecular force field parameters based on sparse grid methods
Reith, Dirk; Hülsmann, Marco
Zeitschriftenaufsatz
2013Sparse grids and applications
: Garcke, J.; Griebel, M.
Buch
2013Sparse grids in a nutshell
Garcke, J.
Aufsatz in Buch
2013Structure and thermodynamics of H3O+(H2O)8 clusters: A combined molecular dynamics and quantum mechanics approach
Temelso, B.; Köddermann, T.; Kirschner, K.N.; Klein, K.; Shields, G.C.
Zeitschriftenaufsatz
2013SVM based descriptor selection and classification of neurodegenerative disease drugs for pharmacological modeling
Shahid, M.; Cheema, M.S.; Klenner, A.; Younesi, E.; Hofmann-Apitius, M.
Zeitschriftenaufsatz
2013Synthesis, molecular docking studies, and in vitro screening of sulfanilamide-thiourea hybrids as antimicrobial and urease inhibitors
Saeed, A.; Zaib, S.; Pervez, A.; Mumtaz, A.; Shahid, M.; Iqbal, J.
Zeitschriftenaufsatz
2013Time Series Forecasting using Sparse Grids
Garcke, J.; Gerstner, T.; Griebel, M.
Studie
2013Towards addressing CPU-intensive seismological applications in Europe
Carpené, M.; Klampanos, I.A.; Leong, S.H.; Casarotti, E.; Danecek, P.; Ferini, G.; Gemünd, A.; Krause, A.; Krischer, L.; Magnoni, F.; Simon, M.; Spinuso, A.; Trani, L.; Atkinson, M.; Erbacci, G.; Frank, A.; Igel, H.; Rietbrock, A.; Schwichtenberg, H.; Vilotte, J.-P.
Konferenzbeitrag
2013Using Hyperbolic Cross Approximation to measure and compensate Covariate Shift
Vanck, Thomas; Garcke, Jochen
Konferenzbeitrag
2013Using LAMA for efficient AMG on hybrid clusters
Kraus, J.; Förster, M.; Brandes, T.; Soddemann, T.
Zeitschriftenaufsatz
2013Utilization of efficient gradient and Hessian computations in the force field optimization process of molecular simulations
Hülsmann, M.; Kopp, S.; Huber, M.; Reith, D.
Zeitschriftenaufsatz
2013Variational Mass Lumping in the Partition of Unity Method
Schweitzer, M.A.
Zeitschriftenaufsatz
2013Why the partition coefficient of ionic liquids is concentration-dependent
Köddermann, T.; Reith, D.; Arnold, A.
Zeitschriftenaufsatz
2013Wolf2Pack - portal based atomistic force-field development
Krämer-Fuhrmann, Ottmar; Neisius, Jens; Gehlen, Niklas; Reith, Dirk; Kirschner, Karl N.
Zeitschriftenaufsatz
2012Advanced multigrid application for the acceleration of Groundwater simulations
Thum, Peter; Stüben, Klaus
Konferenzbeitrag
2012Algebraic multigrid for the multi-ion transport and reaction model. A physics-aware approach
Thum, Peter
Dissertation
2012Analysis of the scatter of a deploying airbag
Brown, Richard; Bloomfield, Mike; Thole, Clemens-August; Nikitina, Lialia
Konferenzbeitrag
2012Applications for MBS-FEM coupling with MpCCI using automotive simulation as example
Bayrasy, P.; Burger, M.; Dehning, C.; Kalmykov, I.; Speckert, M.
Konferenzbeitrag
2012Aspects of adaptive hierarchical RBF metamodels for optimization
Bühren, Georg van; Hornung, Nils; Clees, Tanja; Nikitina, Lialia
Zeitschriftenaufsatz
2012Compensation of pressure peaks in PWK-type hydraulic pumps
Osiecki, L.; Patrosz, P.; Zawistowski, T.; Landvogt, B.; Piechna, J.; Zyliñski, B.
Aufsatz in Buch
2012Computational 3D simulation of calcium leaching in cement matrices
Gaitero, J.J.; Dolado, J.S.; Neuen, C.; Heber, F.; Koenders, E.
Bericht
2012Continuous Integration für die Entwicklung einer numerischen Bibliothek
Büchel, Alexander
Bachelor Thesis
2012CoreGRID/ERCIM workshop on grids, clouds and P2P computing - CGWS2011. Introduction
Danelutto, M.; Desprez, F.; Getov, V.; Ziegler, W.
Konferenzbeitrag
2012CPU vs. GPU - Performance comparison for the Gram-Schmidt algorithm
Brandes, T.; Arnold, A.; Soddemann, T.; Reith, D.
Zeitschriftenaufsatz
2012Data compression for computational fluid dynamics on irregular grids
Rettenmeier, M.
Dissertation
2012Design, synthesis and molecular modelling of novel methyl[4-oxo-2-(aroylimino)-3-(substituted phenyl)thiazolidin-5-ylidene]acetates as potent and selective aldose reductase inhibitors
Ali, S.; Saeed, A.; Abbas, N.; Shahid, M.; Bolte, M.; Iqbal, J.
Zeitschriftenaufsatz
2012Development of a benchmark corpus to support the automatic extraction of drug-related adverse effects from medical case reports
Gurulingappa, Harsha; Rajput, Abdul-Mateen; Roberts, Angus; Fluck, Juliane; Hofmann-Apitius, Martin; Toldo, Luca
Zeitschriftenaufsatz
2012A dimension adaptive combination technique using localised adaptation criteria
Garcke, J.
Konferenzbeitrag
2012e-Government and Policy Simulation in Intelligent Virtual Environments
Aisopos, F.; Kardara, M.; Senger, P.; Klinger, R.; Papaoikonomou, A.; Tserpes, K.; Gardner, M.; Varvarigou, T.
Konferenzbeitrag
2012The effect of neutral ion aggregate formation on the electrical conductivity of an ionic liquid and its mixtures with chloroform
Köddermann, T.; Klembt, S.; Klasen, D.; Paschek, D.; Kragl, U.; Ludwig, R.
Zeitschriftenaufsatz
2012Efficient AMG on heterogeneous systems
Kraus, Jiri; Förster, Malte
Konferenzbeitrag
2012Effiziente und neuartige Verfahren zur Optimierung von Kraftfeldparametern bei atomistischen Molekularen Simulationen kondensierter Materie
Hülsmann, M.
Dissertation
2012Entwicklung einer Steuerung für Löser linearer Gleichungssysteme
Buschulte, Kai
Master Thesis
2012Entwicklung und Implementierung von Partitionierungsstrategien für dünn besetzte Matrizen auf hybriden Systemen mit verteiltem Speicher
Schubert, Lauretta
: Berrendorf, Rudolf (Prüfer); Becker, Peter (Prüfer)
Master Thesis
2012Evaluierung der Performanz von GPUDirect 2.0 auf einem Multi-GPU System
Drost, Michael
Bachelor Thesis
2012General sales forecast models for automobile markets and their analysis
Hülsmann, Marco; Borscheid, Detlef; Friedrich, Christoph M.; Reith, Dirk
Zeitschriftenaufsatz
2012Generalizations of the finite element method
Schweitzer, Marc Alexander
Zeitschriftenaufsatz
2012A glycam-based force field for simulations of lipopolysaccharide membranes: Parametrization and validation
Kirschner, K.N.; Lins, R.D.; Maass, A.; Soares, T.A.
Zeitschriftenaufsatz
2012Greedy and randomized versions of the multiplicative Schwarz method
Griebel, M.; Oswald, P.
Zeitschriftenaufsatz
2012Improving Distantly Supervised Extraction of Drug-Drug and Protein-Protein Interactions
Bobic, T.; Klinger, R.; Thomas, P.; Hofmann-Apitius, M.
Konferenzbeitrag
2012Influence of thiostrepton binding on the ribosomal GTPase associated region characterized by molecular dynamics simulation
Wolf, A.; Baumann, S.; Arndt, H.D.; Kirschner, K.N.
Zeitschriftenaufsatz
2012Loewy Decomposition of Linear Differential Equations
Schwarz, Fritz
Buch
2012Mining biomarker information in biomedical literature
Younesi, Erfan; Toldo, Luca; Müller, Bernd; Friedrich, Christoph M.; Novac, Natalia; Scheer, Alexander; Hofmann-Apitius, Martin; Fluck, Juliane
Zeitschriftenaufsatz
2012A new optimization phase for scientific workflow management systems
Holl, S.; Zimmermann, O.; Hofmann-Apitius, M.
Konferenzbeitrag
2012Nonlinear metamodeling of bulky data and applications in automotive design
Nikitina, L.; Nikitin, I.; Clees, T.
Konferenzbeitrag
2012A note on the construction of l-fold sparse tensor product spaces
Griebel, M.; Harbrecht, H.
Bericht
2012On a connection between maximum variance unfolding, shortest path problems and isomap
Paprotny, A.; Garcke, J.
Elektronische Publikation
2012Online communities support policy-making: The need for data analysis
Klinger, R.; Senger, P.; Madan, S.; Jacovi, M.
Konferenzbeitrag
2012OPTIMIS: A holistic approach to cloud service provisioning
Juan Ferrer, A.; Hernández, F.; Tordsson, J.; Elmroth, E.; Ali-Eldin, A.; Zsigri, C.; Sirvent, R.; Guitart, J.; Badia, R.M.; Djemame, K.; Ziegler, W.; Dimitrakos, T.; Nair, S.K.; Kousiouris, G.; Konstanteli, K.; Varvarigou, T.; Hudzia, B.; Kipp, A.; Wesner, S.; Corrales, M.; Forgo, N.; Sharif, T.; Sheridan, C.
Zeitschriftenaufsatz
2012Quantum mechanical study of sulfuric acid hydration: Atmospheric implications
Temelso B.; Morrell, T.E.; Shields, R.M.; Allodi, M.A.; Wood, E. K.; Kirschner, K.N.; Castonguay, T.C.; Archer, K.A.; Shields, G.C.
Zeitschriftenaufsatz
2012Reliability analysis of river bed simulation models
Clees, T.; Nikitin, I.; Nikitina, L.; Kopmann, R.
Konferenzbeitrag
2012Revealing the mechanism of thiopeptide antibiotics at atomistic resolution
Wolf, Antje
Dissertation
2012Secure multi-level parallel execution of scientific workflows on HPC grid resources by combining taverna and UNICORE services
Holl, S.; Zimmermann, O.; Demuth, B.; Schuller, B.; Hofmann-Apitius, M.
Konferenzbeitrag
2012Sensitivity and robustness aspects in focused ultrasonic therapy simulation
Borsotto, D.; Clees, T.; Nikitin, I.; Nikitina, L.; Steffes-Lai, D.; Thole, C.-A.
Konferenzbeitrag
2012SLA-based management of software licenses as web service resources in distributed computing infrastructures
Cacciari, Claudio; Mallmann, Daniel; D'Andria, Francesco; Hagemeier, Björn; Rumpl, Angela; Ziegler, Wolfgang; Zsigri, Csilla; Martrat, Josep
Zeitschriftenaufsatz
2012SLAs for energy-efficient data centres: The standards-based approach of the OPTIMIS project
Ziegler, Wolfgang
Konferenzbeitrag
2012A sparse grid based generative topographic mapping for the dimensionality reduction of high-dimensional data
Griebel, M.; Hullmann, A.
Bericht
2012A standards-based approach for negotiating service QoS with cloud infrastructure providers
Rasheed, Hassan; Rumpl, Angela; Wäldrich, Oliver; Ziegler, Wolfgang
Konferenzbeitrag
2012Statistical analysis of forming processes as a first step in a process-chain analysis: Novel PRO-CHAIN components
Steffes-lai, D.; Clees, T.
Konferenzbeitrag
2012Steady-state behavior of large water distribution systems: Algebraic multigrid method for the fast solution of the linear step
Zecchin, Aaron; Thum, Peter; Simpson, Angus; Tischendorf, Caren
Zeitschriftenaufsatz
2012Stochastic analysis and nonlinear metamodeling of crash test simulations and their application in automotive design
Nikitin, I.; Nikitina, L.; Clees, T.
Aufsatz in Buch
2012Text mining in livestock animal science: Introducing the potential of text mining to animal sciences
Sahadevan, S.; Hofmann-Apitius, M.; Schellander, K.; Tesfaye, D.; Fluck, J.; Friedrich, C.M.
Zeitschriftenaufsatz
2012Towards holistic cloud management
Tordsson, Johan; Djemame, Karim; Espling, Daniel; Katsaros, Gregory; Ziegler, Wolfgang; Wäldrich, Oliver; Konstanteli, Kleopatra; Sajjad, Ali; Rajarajan, Muttukrishnan; Gallizo, Georgina; Nair, Srijith
Aufsatz in Buch
2012Uncertainty quantification using nonparametric quantile estimation and metamodeling
Rhein, B.; Clees, T.; Ruschitzka, M.
Konferenzbeitrag
2012Weakly Labeled Corpora as Silver Standard for Drug-Drug and Protein-Protein Interaction
Thomas, P.; Bobic, T.; Hofmann-Apitius, M.; Leser, U.; Klinger, R.
Konferenzbeitrag