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  4. Automatic Detection of Tumor Buds in Pan-Cytokeratin Stained Colorectal Cancer Sections by a Hybrid Image Analysis Approach
 
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2019
Conference Paper
Title

Automatic Detection of Tumor Buds in Pan-Cytokeratin Stained Colorectal Cancer Sections by a Hybrid Image Analysis Approach

Abstract
This contribution introduces a novel approach to the automatic detection of tumor buds in a digitalized pan-cytokeratin stained colorectal cancer slide. Tumor buds are representing an invasive pattern and are frequently investigated as a new diagnostic factor for measuring the aggressiveness of colorectal cancer. However, counting the number of buds under the microscope in a high power field by eyeballing is a strenuous, lengthy and error-prone task, whereas an automated solution could save time for the pathologists and enhance reproducibility. We propose a new hybrid method that consists of two steps. First possible tumor bud candidates are detected using a chain of classical image processing methods. Afterwards a convolutional deep neural network is applied to filter and reduce the number of false positive candidates detected in the first step. By comparing the automatically detected buds with a gold standard created by manual annotations, we gain a score of 0.977 for precision and 0.934 for sensitivity in our test sets on over 8.000 tumor buds.
Author(s)
Bergler, M.
Benz, M.
Rauber, D.
Hartmann, D.
Kötter, M.
Eckstein, M.
Schneider-Stock, R.
Hartmann, A.
Merkel, S.
Bruns, V.
Wittenberg, T.
Geppert, C.
Mainwork
Digital Pathology. 15th European Congress, ECDP 2019. Proceedings  
Conference
European Congress on Digital Pathology (ECDP) 2019  
DOI
10.1007/978-3-030-23937-4_10
Language
English
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