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Functional exploration of natural networks and ecological communities

 
: Ankenbrand, M.J.; Hohlfeld, S.C.Y.; Weber, L.; Förster, F.; Keller, A.

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Methods in ecology and evolution : MEE 9 (2018), No.9, pp.2028-2033
ISSN: 2041-210X
English
Journal Article
Fraunhofer IME ()

Abstract
Species composition assessment of ecological communities and networks is an important aspect of biodiversity research. Yet often ecological traits of organisms in a community are more informative than scientific names only. Furthermore, other properties like threat status, invasiveness, or human usage are relevant to many studies, but cannot be evaluated from taxonomy alone. Despite public databases collecting such information, it is still a tedious manual task to enrich community analyses with such, especially for large-scaled data. Thus we aimed to develop a public and free tool that eases bulk trait mapping of community data in a web browser, implemented with current standard web and database technologies. Here, we present the Fennec (Functional Exploration of Natural Networks and Ecological Communities), a workbench that eases the process of mapping publicly available trait data to the user's communities in an automated process. Usage is either by a local self-hosted or a public instance (https://fennec.molecular.eco) covering exemplary traits. Alongside the software, we also provide usage and hosting documentation as well as online tutorials. The Fennec aims to motivate public trait data submission and its reuse in meta-analyses. Further, it is an open-source development project with the code freely available to use and open for community contributions (https://github.com/molbiodiv/fennec).

: http://publica.fraunhofer.de/documents/N-524399.html