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PyBEL: A computational framework for biological expression language

: Hoyt, Charles Tapley; Konotopez, Andrej; Ebeling, Christian

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Bioinformatics 34 (2018), No.4, pp.703-704
ISSN: 1367-4803
ISSN: 1460-2059
Journal Article, Electronic Publication
Fraunhofer SCAI ()

Biological Expression Language (BEL) assembles knowledge networks from biological relations across multiple modes and scales. Here, we present PyBEL; a software package for parsing, validating, converting, storing, querying, and visualizing networks encoded in BEL. PyBEL is implemented in platform-independent, universal Python code. Its source is distributed under the Apache 2.0 License at