Fraunhofer-Gesellschaft

Publica

Hier finden Sie wissenschaftliche Publikationen aus den Fraunhofer-Instituten.
2019PTSD Biomarker Database: Deep Dive Metadatabase for PTSD Biomarkers, Visualizations and Analysis Tools
Domingo-Fernandez, Daniel; Provost, Allison; Kodamullil, Alpha Tom; Marín-Llaó, Josep; Lasseter, Heather; Diaz, Kristophe; Daskalakis, Nikolaos P.; Lancashire, Lee; Hofmann-Apitius, Martin; Haas, Magali
Zeitschriftenaufsatz
2018BEL2ABM: agent-based simulation of static models in Biological Expression Language
Gündel, Michaela; Hoyt, Charles Tapley; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2018Insights into the Folding of Disulfide-Rich μ-Conotoxins
Ajay Abisheck Paul George; Heimer, Pascal; Maaß, Astrid; Hamaekers, Jan; Hofmann-Apitius, Martin; Biswas, Arijit; Imhof, Diana
Zeitschriftenaufsatz
2018A systematic approach for identifying shared mechanisms in epilepsy and its comorbidities
Hoyt, Charles Tapley; Domingo-Fernandez, Daniel; Balzer, Nora; Güldenpfennig, Anka; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2018Using Multi-Scale Genetic, Neuroimaging and Clinical Data for Predicting Alzheimer's Disease and Reconstruction of Relevant Biological Mechanisms
Khanna, Shashank; Domingo-Fernández, Daniel; Iyappan, Anandhi; Emon, Mohammad Asif; Hofmann-Apitius, Martin; Fröhlich, Holger
Zeitschriftenaufsatz
2017Multimodal mechanistic signatures for neurodegenerative diseases (NeuroMMSig): A web server for mechanism enrichment
Domingo-Fernández, Daniel; Kodamullil, Alpha Tom; Iyappan, Anandhi; Naz, Mufassra; Emon, Mohammad Asif; Raschka, Tamara; Karki, Reagon; Springstubbe, Stephan; Ebeling, Christian; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Systematic Analysis of GWAS Data Reveals Genomic Hotspots for Shared Mechanisms between Neurodegenerative Diseases
Naz, Mufassra; Younesi, Erfan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2017Trial watch: Tracing investment in drug development for Alzheimer disease
Kodamullil, Alpha Tom; Zekri, Firas; Sood, Meemansa; Hengerer, Bastian; Canard, Luc; McHale, Duncan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2016Reasoning over genetic variance information in cause-and-effect models of neurodegenerative diseases
Naz, Mufassra; Kodamullil, Alpha Tom; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2015Bioinformatics mining and modeling methods for the identification of disease mechanisms in neurodegenerative disorders
Hofmann-Apitius, Martin; Ball, Gordon; Gebel, Stephan; Bagewadi, Shweta; Bono, Bernard de; Schneider, Reinhard; Page, Matt; Kodamullil, Alpha Tom; Younesi, Erfan; Ebeling, Christian; Tegnér, Jesper; Canard, Luc
Zeitschriftenaufsatz
2015Computational modelling approaches on epigenetic factors in neurodegenerative and autoimmune diseases and their mechanistic analysis
Irin, Afroza Khanam; Kodamullil, Alpha Tom; Gündel, Michaela; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2015Construction of biological networks from unstructured information based on a semi-automated curation workflow
Szostak, Justyna; Ansari, Sam; Madan, Sumit; Fluck, Juliane; Talikka, Marja; Iskandar, Anita; Leon, Hector de; Hofmann-Apitius, Martin; Peitsch, Manuel C.; Hoeng, Julia
Zeitschriftenaufsatz
2015NeuroTransDB: Highly curated and structured transcriptomic metadata for neurodegenerative diseases
Bagewadi, Shweta; Adhikari, Subash; Dhrangadhariya, Anjani; Irin, Afroza Khanam; Ebeling, Christian; Namasivayam, Aishwarya Alex; Page, Matthew; Hofmann-Apitius, Martin; Senger, Philipp
Zeitschriftenaufsatz
2015Systems approach for the selection of micro-RNAs as therapeutic biomarkers of anti-EGFR monoclonal antibody treatment in colorectal cancer
Deyati, Avisek; Bagewadi, Shweta; Senger, Philipp; Hofmann-Apitius, Martin; Novac, Natalia
Zeitschriftenaufsatz
2015Towards the taxonomy of human disease. Editorial
Hofmann-Apitius, Martin; Alarcon-Riquelme, M.E.; Chamberlain, C.; McHale, D.
Zeitschriftenaufsatz
2014BELIEF - a semiautomatic workflow for BEL network creation
Fluck, Juliane; Madan, Sumit; Ansari, Sam; Szostak, Justyna; Hoeng, Julia; Zimmermann, Marc; Hofmann-Apitius, Martin; Peitsch, Manuel C
Konferenzbeitrag
2014Linking hypothetical knowledge patterns to disease molecular signatures for biomarker discovery in Alzheimer's disease
Malhotra, Ashutosh; Younesi, Erfan; Bagewadi, Shweta; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2014NeuroRDF: Semantic data integration strategies for modeling neurodegenerative diseases
Iyappan, Anandhi; Bagewadi, Shweta; Page, Matthew; Hofmann-Apitius, Martin; Senger, Philipp
Konferenzbeitrag
2013Challenges and opportunities for oncology biomarker discovery
Younesi, Erfan; Hofmann-Apitius, Martin; Dyati, Avisek; Novac, Natalia
Zeitschriftenaufsatz
2013From integrative disease modeling to predictive, preventive, personalized and participatory (P4) medicine
Younesi, Erfan; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2013HuPSON: The human physiology simulation ontology
Gündel, Michaela; Younesi, Erfan; Malhotra, Ashutosh; Wang, Jiali; Li, Hui; Zhang, Bijun; Bono, Bernard de; Mevissen, Heinz-Theodor; Hofmann-Apitius, Martin
Zeitschriftenaufsatz
2013SCAI: Extracting drug-drug interactions using a rich feature vector
Bobic, Tamara; Fluck, Juliane; Hofmann-Apitius, Martin
Konferenzbeitrag
2012Development of a benchmark corpus to support the automatic extraction of drug-related adverse effects from medical case reports
Gurulingappa, Harsha; Rajput, Abdul-Mateen; Roberts, Angus; Fluck, Juliane; Hofmann-Apitius, Martin; Toldo, Luca
Zeitschriftenaufsatz
2012Mining biomarker information in biomedical literature
Younesi, Erfan; Toldo, Luca; Müller, Bernd; Friedrich, Christoph M.; Novac, Natalia; Scheer, Alexander; Hofmann-Apitius, Martin; Fluck, Juliane
Zeitschriftenaufsatz
2011Information retrieval framework for technology survey in biomedical and chemistry literature
Gurulingappa, Harsha; Müller, Bernd; Hofmann-Apitius, Martin; Fluck, Juliane
Konferenzbeitrag
2011A semantic platform for information retrieval from e-health records
Gurulingappa, Harsha; Müller, Bernd; Hofmann-Apitius, Martin; Fluck, Juliane
Konferenzbeitrag