Fraunhofer-Gesellschaft

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Hier finden Sie wissenschaftliche Publikationen aus den Fraunhofer-Instituten.
2019RNAcentral: a hub of information for non-coding RNA sequences
Sweeney, B.A.; Petrov, A.I.; Burkov, B.; Finn, R.D.; Bateman, A.; Szymanski, M.; Karlowski, W.M.; Gorodkin, J.; Seemann, S.E.; Cannone, J.J.; Gutell, R.R.; Fey, P.; Basu, S.; Kay, S.; Cochrane, G.; Billis, K.; Emmert, D.; Marygold, S.J.; Huntley, R.P.; Lovering, R.C.; Frankish, A.; Chan, P.P.; Lowe, T.M.; Bruford, E.; Seal, R.; Vandesompele, J.; Volders, P.J.; Paraskevopoulou, M.; Ma, L.; Zhang, Z.; Griffiths-Jones, S.; Bujnicki, J.M.; Boccaletto, P.; Blake, J.A.; Bult, C.J.; Chen, R.S.; Zhao, Y.; Wood, V.; Rutherford, K.; Rivas, E.; Cole, J.; Laulederkind, S.J.F.; Shimoyama, M.; Gillespie, M.E.; Orlic-Milacic, M.; Kalvari, I.; Nawrocki, E.; Engel, S.R.; Cherry, J.M.; Berardini, T.Z.; Hatzigeorgiou, A.; Karagkouni, D.; Howe, K.; Davis, P.; Dinger, M.; He, S.M.; Yoshihama, M.; Kenmochi, N.; Stadler, P.F.; Williams, K.P.
Zeitschriftenaufsatz
2018Comparative RNA genomics
Backofen, Rolf; Gorodkin, Jan; Hofacker, Ivo L.; Stadler, Peter F.
Aufsatz in Buch
2013The RNAsnp web server: Predicting SNP effects on local RNA secondary structure
Sabarinathan, Radhakrishnan; Tafer, Hakim; Seemann, Stefan E.; Hofacker, Ivo L.; Stadler, Peter F.; Gorodkin, Jan
Zeitschriftenaufsatz
2013RNAsnp: Efficient detection of local RNA secondary structure changes induced by SNPs
Sabarinathan, Radhakrishnan; Tafer, Hakim; Seemann, Stefan E.; Hofacker, Ivo L.; Stadler, Peter F.; Gorodkin, Jan
Zeitschriftenaufsatz
2012deepBlockAlign: A tool for aligning RNA-seq profiles of read block patterns
Langenberger, D.; Pundhir, Sachin; Ekstrom, Claus T.; Stadler, Peter F.; Hoffmann, Steve; Gorodkin, Jan
Zeitschriftenaufsatz
2011Fast local fragment chaining using sum-of-pair gap costs
Otto, C.; Hoffmann, S.; Gorodkin, J.; Stadler, P.F.
Zeitschriftenaufsatz
2011maxAlike: Maximum likelihood-based sequence reconstruction with application to improved primer design for unknown sequences
Menzel, Peter; Stadler, Peter F.; Gorodkin, Jan
Zeitschriftenaufsatz
2009Maximum likelihood estimation of weight matrices for targeted homology search
Menzel, P.; Gorodkin, J.; Stadler, P.F.
Konferenzbeitrag
2009Sequence assembly. Review
Scheibye-Alsing, K.; Hoffmann, S.; Frankel, A.; Jensen, P.; Stadler, P.F.; Mang, Y.; Tommerup, N.; Gilchrist, M.J.; Nygard, A.B.; Cirera, S.; Jorgensen, C.B.; Fredholm, M.; Gorodkin, J.
Zeitschriftenaufsatz
2009Structural profiles of human miRNA families from pairwise clustering
Kaczkowski, Bogumil; Torarinsson, Elfar; Reiche, Kristin; Havgaard, Jakob Hull; Stadler, Peter F.; Gorodkin, Jan
Zeitschriftenaufsatz
2009The tedious task of finding homologous noncoding RNA genes
Menzel, P.; Gorodkin, J.; Stadler, P.F.
Zeitschriftenaufsatz